Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01058 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCAGCCTCAGATTCATTTTCACTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCTAGAAGAAGCCCAAGTCCTCCCACTTCCTCCTCTACAATGTCCTCTTCTCTTGGCAGCAACAGCAAGGGTGGCAGTGGCACTTCAGCCAATACCACAACCACCACCGGTGCTGCAGCCCCAACACCCTCTGACAACAACAACCCTCCTCAGGATTCCAGCCCTGAAAAATGTGGTATCAGGATGGATGACTGGGAAGGTCAAGATCAATCCATTCTCAGGCTAATCATGGGGGATGTTGAAGACCCTTCTGTTGGATTGAGCAAGCTCTTGCAAAGCACTGCCTGTGGCTCTCAGAGTGTTGATTTCAATGCAGGCTTTGGTATTGTGGATCAAGGGTTGAATATGGTGAGTGGTGGTATTGACCCTTCAGGGAATTACCCTACTGGTTTCCCTTTCATTGCGGATAATATTGATGGCCAAAATGGCAAGCCTGGGTCTGCGGCTGGCCAGGTTTCAGAATCTGTAGTTTTCTCTGCTAACAATCCTCTTATGGTGTCATCATCTGTGTCTCCTGGTGTGTTCACTTCTCAGCAGCAGCAGCAGCAGCACGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTTATCAACCCCCAGTTTATGTTAAATCAGAACCAAGTTCAGTTCTCAGAGAACCCTTCTTTCTTTGTGCCATTGATGTATCCCCAGGTTCAGGAGCAGCAGGTTTTCCCTCAGCATCAAGCGAAGCGCCCTCTCTTTGACACAACCGGGCACAATTATCAGGTTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGCAGGAGGCAGCAAACACAGCTTCCATTATTTCCTCCCCATATGCAACAACAACAACAACAACAATCAATTGTTATGCCATCTGCTAAACAGCAGAAGGTGAGTTCCGCCGGAGACGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAAGCCTTTTCAGAGGACTGCTTTCTACATGAAGGAAGCCTTGATGTCACTGCTTCATTCAAACGCTCACAGTTTCATGGCTTTCTCACCAATTAGTTTCATATTCAAAATTGGAGCTTATAAGTCTTTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAATTTCACTTGTAACCAAGCCCTCATTGAATCTGTCGAAAGGTTTGACCGTATTCATGTCATTGATTTTGATATTGGGTTTGGAGTGCAGTGGTCATCTTTTATGCAAGAAATTGCCTTGAGAAGTAGTGCTGCACCTTCTCTCAAAGTCACTGCCATTGTGTCACCCTCCACATGTGATGAGGTTGAACTCAATTTCACCAAAGAAAATTTGATTCAATACGCAAAGGACATCAACGTGTCTTTTGAGTTCAGTGTTTTAAACATTGAATCATTGAACACTCCTTCTCCACTTCTTGGCCAATTCTTTGATAACGAGGCCATTGCTGTGAATATGCCAGTTTCAAGTTTCACAAACTATCCATCATTGTTCCCTTCAGCTCTTCACTTTGTAAAGCAGCTCAGGCCAAAGATTGTTGTCACATTGGACAGAATTTGTGATCGAATTGACTTAGCACTTCCCAATAATGTAGTCCACGTTCTCCAATGTTATTCAGCCTTGCTGGAATCGCTGGACGCGGTGAATGTGAATCTTGATGTCCTACAAAAGATTGAGAGGCATTTCATCCAACCTGCCATCAAGAAAATTATTCTTGGCCACCACCATTCTCAAGAAAAACTACCTCCATGGAGGAACCTCTTTCTACAATCTGGATTTTCTCCATTCACTTTCAGCAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTTCAGAGGGCACCTGTGAGGGGATTTCACGTGGAAAGAAAGCCTTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAGTTTCTACTTGGAGATGCTGA 2178 0.4532 MKAMPLPFEEFQGKGVLDFSSASDSFSLLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPSPPTSSSTMSSSLGSNSKGGSGTSANTTTTTGAAAPTPSDNNNPPQDSSPEKCGIRMDDWEGQDQSILRLIMGDVEDPSVGLSKLLQSTACGSQSVDFNAGFGIVDQGLNMVSGGIDPSGNYPTGFPFIADNIDGQNGKPGSAAGQVSESVVFSANNPLMVSSSVSPGVFTSQQQQQQHEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPLMYPQVQEQQVFPQHQAKRPLFDTTGHNYQVPRLPLLDSGQEVFGRRQQTQLPLFPPHMQQQQQQQSIVMPSAKQQKVSSAGDDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRTAFYMKEALMSLLHSNAHSFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIESVERFDRIHVIDFDIGFGVQWSSFMQEIALRSSAAPSLKVTAIVSPSTCDEVELNFTKENLIQYAKDINVSFEFSVLNIESLNTPSPLLGQFFDNEAIAVNMPVSSFTNYPSLFPSALHFVKQLRPKIVVTLDRICDRIDLALPNNVVHVLQCYSALLESLDAVNVNLDVLQKIERHFIQPAIKKIILGHHHSQEKLPPWRNLFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFHVERKPSSLVLCWQRKELISVSTWRC 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01058 725 Pfam GRAS domain family 370 724 IPR005202 -
Spst4g01058 725 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 339 720 IPR005202 -
Spst4g01058 725 ProSiteProfiles GRAS family profile. 359 724 IPR005202 -
Spst4g01058 725 MobiDBLite consensus disorder prediction 51 119 - -
Spst4g01058 725 MobiDBLite consensus disorder prediction 51 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01058 Spst-Chr4 42948988 42951165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01058 367 725 GRAS Transcription Factor Family AT4G00150 55.249 1.03e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst4g01058 GRAS 3.4e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01058 - - gmx:100801785 1182.93