Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01057 ATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTTCAAGGGAAGGCAGTGTTGGATTTCTCTTCAGTCTCAGATTCATTTTCACTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGACGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCGAACTCTTCCACCATGTCCACTTCCCATGGCAGTAGCAACACCATCAGTAAGGGTGGCAGTGGTGCCTCAACCAATAACACCACTTGTTACACTGCAACCCTTTCTCAGAACCCTCCTCACGCATTGGAAACCAGCACAGAAAAATGTGGTGAGAGAATGGAGGACTGGGAGGGTCAAGATCAATCCATTCTGAGACTAATCATGTCAGATGTTGACCCTTCTCCAGGGTTGAGCAAGCTCTTCCAGGGCAGTGGCTGTGGCTCTCAACAAAGTGTTGATTTCAATGCAGGTTTTGGTGTTGTTGATCAAGGGTTGAACATGGTAAGTATTGTTGACCCTTCAGGGAATTACCCTGGTTTCCCTTTTATTGCTGAGAATATAGATGGCCATAATGGTAAGACTGGTACTTTGTCTGTCGGAGAACCAATGTTTTCTGCTTCTGGTAACAATTCTTTGGTGTTTTCAACATCTCCTGGTGGGTTTAATTCTCAGCAACAAGTGATTGGGGAGGTGGATGAGAAGCCTCAAGTCATCAATCCCCAGTTTGAGTTAAACCAGACTCAAGTTCAATTCTCTGAGAACCCATCTTACTTTGTGCCAATGATGTGCCCCCAATTGCAGGAACAGCAAGTTTTCACTCAGCATCCAGCAAAACGCCCCGTTTTTGAGCCTGTTGGGCACAATTACCAGGCTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCATCATGTGCAACCGCAGGTTTTGCCATCTGCTAAACCGCAGAAGGCGAGTTCCACCGGAGAAGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATTCAAAACTGCTGAGCTGATAGAAGCTGGGAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATGCTCACAATGTCTTGGCTTTCTCCCCCATTAGTTCCATTTTCAAAATTGAAGCATACAAGTCCTTTTCTGAGATATCACCTGTTATTCAGTTTGCCAACTTCACTACTAATCAAGCAATCATTGAAGCTGTGGAAAGGTTTGATCGTATTCACATTATCGATTTTGATATCGGGTTTGGAGTGCAATGGTCTTCTTTTATGCAAGCGCTTGCCATGAGGAGTAATGGTGTGCCTTCCCTCAAAATCACTGCCATTGTGTCACCCTTCACTTTTGATGAGTTTGAGCTTAATGTGACTCATGAAAAGTTAAACCAATATGCTGAAGACATAAACATGTCTTTTGAGCTCAATGTTTTAAGCATTGAGTCATTGAACACTCCTTCATGTCCACTCTCTGCTCAGTATTATGATAATGAGGCAATTGCTGTGAACATGCCACTTTCTTGTTTCACAAACTGCCCATCATTGTTTCCCTTAGTCCTTCGCATTGTGAAGCAGCTTAGGCCAAAAGTGGTGGCCACTCTTGATAGAAATTGTGACCGACTCGATGTACCATTTTCCACCAATATAGGCCATGCTCTTCATTGTTACTCAGCCTTGCTTGAATCTCTTGATGCTCTGAATGTGAACCTAGATGTCCTTCAAAAGATTGAAAAGCATTTCATCTTGCCAGCCCTTAAGAAGATGATAACAAGTCCCCTTCGTTCACAAGAAAAACTACCTACTTGGAGGAGCATGTTTCTTCAATATGGCTTCTCTCCATTCACATTTAGTAACATCACAGAAGCTCAAGCTGAGTGTTTAGTACAGAAGGCACCTGTAAGGGGATTTCAATTGGAGAGAAAGCACTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTTGTCACAGTTTCAACTTGGAAATGCTGA 2124 0.444 MKAMPFPFEEFQGKAVLDFSSVSDSFSLLLHHPQPKWTIDKDDYCYVGSTEPTSVLDSRRSPNSSTMSTSHGSSNTISKGGSGASTNNTTCYTATLSQNPPHALETSTEKCGERMEDWEGQDQSILRLIMSDVDPSPGLSKLFQGSGCGSQQSVDFNAGFGVVDQGLNMVSIVDPSGNYPGFPFIAENIDGHNGKTGTLSVGEPMFSASGNNSLVFSTSPGGFNSQQQVIGEVDEKPQVINPQFELNQTQVQFSENPSYFVPMMCPQLQEQQVFTQHPAKRPVFEPVGHNYQAPRLPLLDSGQEVFGRRQQTQLPLFPHHVQPQVLPSAKPQKASSTGEDASHQLQQAIFDQLFKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHNVLAFSPISSIFKIEAYKSFSEISPVIQFANFTTNQAIIEAVERFDRIHIIDFDIGFGVQWSSFMQALAMRSNGVPSLKITAIVSPFTFDEFELNVTHEKLNQYAEDINMSFELNVLSIESLNTPSCPLSAQYYDNEAIAVNMPLSCFTNCPSLFPLVLRIVKQLRPKVVATLDRNCDRLDVPFSTNIGHALHCYSALLESLDALNVNLDVLQKIEKHFILPALKKMITSPLRSQEKLPTWRSMFLQYGFSPFTFSNITEAQAECLVQKAPVRGFQLERKHSSLVLCWQRKELVTVSTWKC 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01057 707 ProSiteProfiles GRAS family profile. 340 706 IPR005202 -
Spst4g01057 707 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 324 702 IPR005202 -
Spst4g01057 707 MobiDBLite consensus disorder prediction 52 84 - -
Spst4g01057 707 Pfam GRAS domain family 351 706 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01057 Spst-Chr4 42877199 42879322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01057 348 707 GRAS Transcription Factor Family AT4G00150 53.994 2.09e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst4g01057 GRAS 1.4e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01057 - - pvu:PHAVU_010G072700g 1080.47