LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g00997	ATGCCTGAGCCCCACTCTCCCTGCACCTTCACTTCCCATTTTCCCTTTCAGCCTTATCGCACCACCCGCACCTTGCCAATCACCTCCAACCACGCCCAACACCACTCCAGCTCCCTTCTCAACCCTTCACTGGAGCCTGCGCAGCCCCTATTCAACTCCGGCTGCAGCTCCTCCACTGCGACTCACAACACCACCAAACGGCCACCACGAGCCCCTCACAATCGCTGGACCACCACCACGACCATCCCCATCTCCAGCCTCTCTAATCTTTCCCACCACAAATCACCACCGCTCCTCCATCTCACCGTAGCTAACCGCCACCACTGCACCAGCCCTAGCCACTTACACGACCGCCTTCATCCACAAAATTCTTTCTCATTCCCCTCCGCTGCCACCTCAACCGCGCCACTACGAACCATACCTCGACAACCCCACAGCGAACGCAATCTACGCCCCCAGTCGCACCTCTCTGTGACCCACCTTCCCATTCACGTCGCGACTATCCGTGGTTGTATCCAAGTGGAGGCGTGTGGTTCCAGTGCGGTTTCATTCCGTTTATTTGATTGTGCATTATGCTTCAATTTGATTATGTTGGTTGTTTCTGACGAGTTTAGTTTAAATGGGGGTCGTTTCAAGGAAGAATTTGAAAAGGCAGTGAGTGTGGTTGGAGACACTCCATCTAAAGGAATGTTTATAGACTCTTGCTTCACCCATTGTCAAACATTATCAACAGAGACATGGTTTAAAGCTGACTCACCACATCTTGCCAATACAATAATTGGTAAGGCAGCAGGGGACTGGTTTTATGATCGAAGCCCTTTCAGCCATGTAGATTGCAATTATCCTTGCAACCCCACTTGTCAGAACAGTGTTTCTGATCTAAAAGACCACCCTGAAATATAG	903	0.5105	MPEPHSPCTFTSHFPFQPYRTTRTLPITSNHAQHHSSSLLNPSLEPAQPLFNSGCSSSTATHNTTKRPPRAPHNRWTTTTTIPISSLSNLSHHKSPPLLHLTVANRHHCTSPSHLHDRLHPQNSFSFPSAATSTAPLRTIPRQPHSERNLRPQSHLSVTHLPIHVATIRGCIQVEACGSSAVSFRLFDCALCFNLIMLVVSDEFSLNGGRFKEEFEKAVSVVGDTPSKGMFIDSCFTHCQTLSTETWFKADSPHLANTIIGKAAGDWFYDRSPFSHVDCNYPCNPTCQNSVSDLKDHPEI	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g00997	300	MobiDBLite	consensus disorder prediction	30	77	-	-
	Spst4g00997	300	Pfam	Pectinacetylesterase	210	273	IPR004963	GO:0016787
	Spst4g00997	300	PANTHER	NOTUM-RELATED	211	289	IPR004963	GO:0016787
	Spst4g00997	300	MobiDBLite	consensus disorder prediction	127	153	-	-
	Spst4g00997	300	MobiDBLite	consensus disorder prediction	127	143	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g00997	Spst-Chr4	41770390	41772285	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst4g00997	211	300	Carbohydrate Esterase	AT4G19420	39.200	6.12e-21	90.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g00997	K19882		-	gmx:100780707	157.918