Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00976 ATGCCAGAAAAACCAAAATCTGGGTGTTTTACTGGCTTCTTACGTGTGCTTCTATGTGCTGGAAATGCATCTAGTCCTCCAGTGCACCCCTCTGATCATTTTACAGAATATGAATCAGAAAATGCACATTCCACCAAAGAAACTGTGGTGGTGAATGATGGTTCCACCCCTGGAGTGGTTGCAAGGTTAATGGGGTTGGATTCACTTCCAAACCCCAAATGGGTATTGAAAGGAGGCACCCCAGATTCTGTTCCAAGAAGCAGATCAGTGAACTTTGTGGATTTCTTGCTTGAGTTTGATTCAAGCCGTGCCAACCATAGGAGAGTGAAGACCTCAGCATCGTTCAGAGAGGTTCCTGGTTTGGTTGAGAACCAAAATATTGGTAATAACCTCTTCGTGCTTTGCATGGATGCTGACAAAGACCGAGAGCTTAGACATGAGTTGACGAAATTGGAAACCAGTTTGGGAGAGGTGAAGAAGGGGAAGAGGCAGGGGAGTAGGAACAAGGAGACTGTGAGTGTGAAGAAAGAGAGGAATGAAGGGAAGAACAAGAAAATTTCCAAGCTGAGGAATGAACCAAGGAGAATCCCTTCTTCTACGCATGAAGGTCGAAATCATGAAGATAAAGATTTATCTTCTGTGTCCTCAACTTCCTCTAAGTGTAGTTCTTGTAGTAATAGACAAAACAATGCTGGTTCAAGATCAAGGTTAAACACTTCTTTGGCGAATAAGCACAAGAAGGGGCTTGTGGATCCAAAAGAGAAGAACATGAGAAAGAAGAAGTTATCATTGAAGGTAGAAAGTGAATGCAGCTTGGAAAATCACAGTGCAGTTTCAGTTGTAGATAGCAATCACTATCCTTTCCTTTATGGGACAAATTTTCTAGGTTCAAATTCAAAGAGGGAATCTCCATCACTATTGTCCATGGATGCAGACAGTGCAAGTACTGATAAAGATTACACCTTCATTGATGTCAACAAGGAAGCAGAGTATTTCTCAGAACTGCTGTTGCAGATTCGTACTTTGGCAGAAGATGATGTAAGAGAGTCAGATTGTACCTCCAAACATATACGTGAGAGTGAAAGCTTTAGGGATATCTGTTTTGTGTTTGAGCTTAAAATTTTGGACCATTTATTATACGAGGTCGTCGATGAAATTTCAGAACTTTATTGTTGTTGTTGA 1182 0.4129 MPEKPKSGCFTGFLRVLLCAGNASSPPVHPSDHFTEYESENAHSTKETVVVNDGSTPGVVARLMGLDSLPNPKWVLKGGTPDSVPRSRSVNFVDFLLEFDSSRANHRRVKTSASFREVPGLVENQNIGNNLFVLCMDADKDRELRHELTKLETSLGEVKKGKRQGSRNKETVSVKKERNEGKNKKISKLRNEPRRIPSSTHEGRNHEDKDLSSVSSTSSKCSSCSNRQNNAGSRSRLNTSLANKHKKGLVDPKEKNMRKKKLSLKVESECSLENHSAVSVVDSNHYPFLYGTNFLGSNSKRESPSLLSMDADSASTDKDYTFIDVNKEAEYFSELLLQIRTLAEDDVRESDCTSKHIRESESFRDICFVFELKILDHLLYEVVDEISELYCCC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00976 393 PANTHER OS05G0128300 PROTEIN 3 389 - -
Spst4g00976 393 MobiDBLite consensus disorder prediction 156 213 - -
Spst4g00976 393 Coils Coil 172 192 - -
Spst4g00976 393 MobiDBLite consensus disorder prediction 156 259 - -
Spst4g00976 393 MobiDBLite consensus disorder prediction 214 239 - -
Spst4g00976 393 Pfam DUF761-associated sequence motif 56 71 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00976 Spst-Chr4 41486738 41489475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00976 5 386 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 26.696 1.03e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00976 - - gmx:102668583 461.07