Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00975 ATGGAGGGTCATCATCTTCATCGCCACCAAGGGCAACAACAACAAAGGGTTCAGCCTCAGAATATGAGTGCCAGCGTGGATGTGACTGATAGGTTCCCCCAATGGAGCATCCAAGAGACCAAGGAGTTTCTCGTGATTCGTGCAGAGCTGGATCAGACTTTCATGGAGACCAAGAGGAACAAGCAGTTGTGGGAAGTGATCTCAACAAGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTACAAGGGGTTCGAAACAATGGAGCAAGAAGCAACGAGGCAGCAATTCCCATTTTACAATGAATTCAATGCGATTTTCACGGGAAGGATGCAGAGAATGCTTTGGGCTGAAGCTGAGGGTGTATCGAAGAAGAACAAAGGGACGCAGCTCTCATCGGATGAAGAAGAAGATGGCAATGAAGAGAGTACAGAAGCTGGTGGGGGCAGAAAGAAGAAAAAGGCGAAGATAGCTAGTGGGGGTGGTGGTGGTAGTGGTAGTAGCAGTTCAAACAGTTTGAAGGAGATCTTGGAGGAGTTCATGAGGCAACAGATACAGATAGAATCACAATGGATGGAAGCATTTGAGGCAAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAGGTGTTGGAGAATGAGAGGATACTGATGGAAGAAAGATGGAGAGAACGGGAGGAACAAAGGAGGATAAGAGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAATTACAGCTTTGCTAAACAAGCTAGAAAGGCAAGAAATGTGA 822 0.472 MEGHHLHRHQGQQQQRVQPQNMSASVDVTDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTGRMQRMLWAEAEGVSKKNKGTQLSSDEEEDGNEESTEAGGGRKKKKAKIASGGGGGSGSSSSNSLKEILEEFMRQQIQIESQWMEAFEARENERRLKEMEWRQAMEVLENERILMEERWREREEQRRIREEARAEKRDALITALLNKLERQEM 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00975 273 FunFam Zinc finger and SCAN domain-containing 20 35 96 - -
Spst4g00975 273 CDD GT1 33 96 - -
Spst4g00975 273 Gene3D - 35 96 - -
Spst4g00975 273 ProSiteProfiles Myb-like domain profile. 35 91 IPR001005 -
Spst4g00975 273 MobiDBLite consensus disorder prediction 136 183 - -
Spst4g00975 273 PANTHER FI21293P1 13 269 - -
Spst4g00975 273 MobiDBLite consensus disorder prediction 1 23 - -
Spst4g00975 273 Pfam Myb/SANT-like DNA-binding domain 34 118 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00975 Spst-Chr4 41477985 41479379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00975 30 270 Trihelix Transcription Factor Family AT5G01380 53.759 4.53e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst4g00975 Myb_DNA-bind_4 8.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00975 - - gmx:100791013 365.155