Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00948 ATGGCATTGCCCGGGTGTTTCTATTTCTCTTTTGTTGTGAATGCTCTGGTGGTTGTGGCTCTTGCAACCTCAAATGTCCCACACTTGACAACTAATTACTATGATGACTCTTGCCCCAATGCTTTGATCACCATCAAAACTGTGGTTCAGGCTGCAGTACAGAAGGAGTTTCGCATGGGAGCTTCATTGTTACGCTTACATTTTCTTGATTGCTTTCACAATGGGTGTGATGGTTCGATTCTGTTAGATTCTACATCCTTCATTGACAGTGAAAAGAATGCAAAAGCTATCCAATACGCTCGAGGATTTGACATTGTGGATGAGATAAAGGAGGCAGTGAATGAAGCATGTGGACAATCAGTTGTTTCTTGCGCTGACATTTTGGCTGTTGCTGCTCGAGACTCGGTTGTTGCATTGGGTGGTCCAACATGGGAGGTGGAGTTGGGGAGAAGAGACTCAACCACAGCAAGTCCTGCAGCATCAGATGCAAACATTGCATCACCATTTTCCAACCTCTCTCAACTCATCACCAACTTCAAGAGCCATGGTCTTGATGAGATGGATCTTGTCGTTCTTTCTGGAGCTCACACCATTGGATATGCACGTTGTGCTACATTTAGGGACCATGTCTACAATGACTCCAACATCGATCCAGACTTTGCACAATCAGAACTGGAATCCATTTGCCCTATAATTGGTGGTGACTTCAACCTTGCCGCTTTGGACCCTACTCCCGCCAACTTTGACACATCCTATTTCTCCAATTTGGTTCAAAACAAAGGCCTTCTTCACTCTGATCAACAACTCTTCAGTGGTGCTTCTACTGATGCTCTGGTTCAACAGTACAGCTCCGATGCCGTAGCTTTCTTCGAGGACTTTGCGCTTTCCATGATTAAGATGGGAAGTATTCAGCCTCTCACTGGGGATCAAGGTGAAGTTCGTGTCAACTGCACGAAAGTGAACTAA 966 0.4524 MALPGCFYFSFVVNALVVVALATSNVPHLTTNYYDDSCPNALITIKTVVQAAVQKEFRMGASLLRLHFLDCFHNGCDGSILLDSTSFIDSEKNAKAIQYARGFDIVDEIKEAVNEACGQSVVSCADILAVAARDSVVALGGPTWEVELGRRDSTTASPAASDANIASPFSNLSQLITNFKSHGLDEMDLVVLSGAHTIGYARCATFRDHVYNDSNIDPDFAQSELESICPIIGGDFNLAALDPTPANFDTSYFSNLVQNKGLLHSDQQLFSGASTDALVQQYSSDAVAFFEDFALSMIKMGSIQPLTGDQGEVRVNCTKVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00948 321 Gene3D - 32 317 - -
Spst4g00948 321 ProSiteProfiles Plant heme peroxidase family profile. 28 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PANTHER PEROXIDASE 72-RELATED 25 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 FunFam Peroxidase 32 178 - -
Spst4g00948 321 FunFam Peroxidase 166 300 - -
Spst4g00948 321 CDD secretory_peroxidase 28 320 IPR033905 GO:0004601|GO:0042744
Spst4g00948 321 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 Pfam Peroxidase 46 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Spst4g00948 321 SUPERFAMILY Heme-dependent peroxidases 29 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 Gene3D Peroxidase, domain 2 166 300 - -
Spst4g00948 321 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00948 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00948 Spst-Chr4 39641880 39643139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00948 28 321 Peroxidase AT5G05340 56.711 8.63e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00948 K00430 - gmx:100802035 441.039