Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00945 ATGGTTCACAAGCATTTCTACGAGCTTTCATGTGGAGTTGTTGAAATGGCTTGGATCATGCTTAGTGTTGACTACTCCCGGCTCTTGTGGCAATTAATTGTGGCGAGTGATCGAGCCACAGCAAGAGCCATGTACAAGGGTAGTTTAGGAGGCAAAGCTCAACTTGGATATGTTGAAACTGATCCTTCTGGTCGATATGGTCGTTTCAGGGATATTCTGGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCATTTGATGAGGTCCTAGGACTAGAGGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTCCATTCACCAGTTCTACTTCAACGCCTTTACTCAGAGGTTCATCTCCTTAAGAACTTGGAACATGATTCTATCATGACCTTCCATGATTCTTGGATTGATGTCAATTGTAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTACAGAAAGAAGTACAAGCGAGTAGATATCAGAGCAGTGAAGAACTGGACACGCCAGATTCTAAGTGGTTTGGAGTATTTGCACAGCCATGACCCTCCTGTGATTCATAGAGACCTCAAGTGTGACAATATCTTCATTAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTGGGCCTTGCAGCTGTTCTTCGTGGCTCCCAACATGCACACAGTGTCATAGGTACACCGGAATTTATGGCACCAGAATTGTATGAAGAGGAATATAATGAGCTGGTTGATATATACTCCTTTGGGATGTGCATGGTAGAAATTTTTACATCTGAGTTTCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCAGGGAAGCTGCCAGAAGCCTTTTACAGAATCCATGACTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCAAATGTCTCTGAGAGGTTATCAGCAAAGGAGCTCTTGTTGGACCCATTTTTAGCCAAGGACCAACTAGACTCTCCACTGCCTAGCCCTACATTACCCAGAAAACAAACCCCCACACTCAATTTCACTGCACCACTAGCCAAAGAGCTATCTCCAATGAGTGACCAAACAAAGGACACACACATGACCATCACTGGATCAATCAATGAAGAGGATGACACAATTTTCCTTAAAGTACAAATTTCTAATAAAAGTGGGGAAAAGAGGAATATATTCTTTCCATTTGACACCATAAACGACACTGCGATTGATGTGGCAATAGAGATGGTTAAAGAACTTGAAATTAGTGACTTGGAACCATTGGAGATTGCAGAGATGATTGAGGAAGAAATATCAGCTTTAGTCCCAACATGGAGGGATTGGGGCTCCTCTAAGTATCAAAGACAACATAGTTTTAGCTATGAAGAAGAGTATGATATGAGTAACCACCACCGTTACTTCTCATCATCTTCTCGCTCTTCCTCTCATGGTTCTTCCCATAAGAATAATTCCCACCTCCGCGGGAACCAATACCCTTTTGCCAAAGATTGGCCTCAAGCTATTACTATTGTTTTCAGTGCCATTAAAGATTTTGATTTGGCCACCACTATGAACTATTTTGCAGATGAACTATTTATGAACGATGATGCAAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAATTTCAATTACTGTGACCCTGGCATTGAAGATGGGCATGATCCAACTTTAGTACTAGGAGAAGAAGCCCTTTGCTACTCCCCAAAAGGCAACGACAATTTCACAAGATTCTGTCCTCGAGAAGAAGTGGAAGATGCTGATTTCACCAAACAGTTTTGCAACATGAGAATGGATTCTCATAGGTATCATGGAATCCAGAGGCTAACCAGATTGCGTTCCTTTGTGGATCCGAGGAGACAACAACTGCAACGATCATTGATGGAAGAGATTCACAAGAAAAGGATGTTCAAGACGGTTGGTGCCATTGAAAACATTGGGTTTCAGAATCCAGAGGGAGGTGCGAATTTTTCTTATTAA 2004 0.4266 MVHKHFYELSCGVVEMAWIMLSVDYSRLLWQLIVASDRATARAMYKGSLGGKAQLGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGLEVAWNQVKLGDVFHSPVLLQRLYSEVHLLKNLEHDSIMTFHDSWIDVNCRTFNFITELFTSGTLREYRKKYKRVDIRAVKNWTRQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAVLRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMVEIFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLANVSERLSAKELLLDPFLAKDQLDSPLPSPTLPRKQTPTLNFTAPLAKELSPMSDQTKDTHMTITGSINEEDDTIFLKVQISNKSGEKRNIFFPFDTINDTAIDVAIEMVKELEISDLEPLEIAEMIEEEISALVPTWRDWGSSKYQRQHSFSYEEEYDMSNHHRYFSSSSRSSSHGSSHKNNSHLRGNQYPFAKDWPQAITIVFSAIKDFDLATTMNYFADELFMNDDASSQSSMNSFKCFNFNYCDPGIEDGHDPTLVLGEEALCYSPKGNDNFTRFCPREEVEDADFTKQFCNMRMDSHRYHGIQRLTRLRSFVDPRRQQLQRSLMEEIHKKRMFKTVGAIENIGFQNPEGGANFSY 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00945 667 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00945 667 FunFam probable serine/threonine-protein kinase WNK9 150 330 - -
Spst4g00945 667 SUPERFAMILY Protein kinase-like (PK-like) 69 369 IPR011009 -
Spst4g00945 667 FunFam Probable serine/threonine-protein kinase WNK1 52 148 - -
Spst4g00945 667 Gene3D Phosphorylase Kinase; domain 1 52 148 - -
Spst4g00945 667 Pfam Protein kinase domain 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00945 667 CDD STKc_WNK 65 325 - -
Spst4g00945 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Spst4g00945 667 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00945 667 Gene3D Transferase(Phosphotransferase) domain 1 150 331 - -
Spst4g00945 667 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 55 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00945 Spst-Chr4 39421312 39425990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00945 55 466 MAP Kinase Kinase Kinase AT3G51630 68.523 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst4g00945 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00945 K08867 - gmx:100816187 1080.86