Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00942 ATGATTGATTTTGGATGGAGGGATTGTGAGCTGTTAGAGGAATTTTGTTTGTTTATATTTTCCATTTACTTTGGAGGTGTTGTTTGTGTTGGAAGGAAGATTCAGGGGAGCATGAGTTGCAGAGAAAGGAACAAAGGGAAAAGAGAAGAGAAGGAATATGAGAACAGTTCTGTTGGATTGGAATCAAAATCAGTGAGGCAAAGGAATGGTTCAATAGAAGATGAACCGCTAACAATTGATGATAGTCTTCTGATTGACCCCAAACTATTATTTATTGGGTCAAAAATTGGAGAGGGAGCTCATGGGAGAGTTTATGAAGGAAGGTATGTAGAACGGATTGTTGCTATTAAAGTTCTGCATCGTGGGAGTACTTTGGAAGAAAGAGTTGCGCTGGAGAATCGTTTTGCACGGGAAGTTAACATGATGTCTCGTGTCCACCATGAGAATCTTGTGAAGTTTATTGGAGCTTGTAAGGATCCTCTGATGGTGATTGTTACAGAGATGTTACCTGGGTTGTCACTGCGAAGATATCTTATCACCATACGCCCTAAACAATTAGAGCTTTATGTGGCTATAAAGTTTGCCCTTGATATTGCTCGAGCCATGGATTGGTTACATGCAAATGGGATCATACATAGAGATCTGAAGCCTGACAATCTGCTGCTCACAGAAAACCAGAAGTCAATTAAACTTGCTGATTTTGGTTTGGCAAGAGAAGAATCTGTGACTGAAATGATGACTGCAGAAACTGGAACTTACCGTTGGATGGCACCTGAGTTGTACAGTACTGTGACATTGCGCCAAGGGGAGAAAAAACATTACAACAATAAGGTTGATGTCTACAGTTTTGGCATCGTTTTGTGGGAGCTACTGACAAATCGCATGCCTTTTGAAGGAATGTCCAATCTACAAGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAACCTTCCTGAAGACATATCTCCTGATCTTGCCTTTATCATACAATCATGCTGGGTTGAAGATCCTAACATGAGACCAAGCTTCAATCAGATTATCCGCATGCTCAATGAGTTCCTCCTCACGCTCCAACAACCACTCCTTTCAGCACTGCCTGAACCTGACAACGAACCTGAGGCCGTGACCCGTACTGGCACCATAACTGACTTTTCTACCCGAAATAAAGTAAGGTTTTCTTTTATTCGCCACTTGTTTTCTTCGAAGAGGACCAAAAGCTAA 1224 0.4183 MIDFGWRDCELLEEFCLFIFSIYFGGVVCVGRKIQGSMSCRERNKGKREEKEYENSSVGLESKSVRQRNGSIEDEPLTIDDSLLIDPKLLFIGSKIGEGAHGRVYEGRYVERIVAIKVLHRGSTLEERVALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTEMLPGLSLRRYLITIRPKQLELYVAIKFALDIARAMDWLHANGIIHRDLKPDNLLLTENQKSIKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPNLPEDISPDLAFIIQSCWVEDPNMRPSFNQIIRMLNEFLLTLQQPLLSALPEPDNEPEAVTRTGTITDFSTRNKVRFSFIRHLFSSKRTKS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00942 407 ProSiteProfiles Protein kinase domain profile. 90 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00942 407 FunFam Kinase suppressor of Ras 1 79 169 - -
Spst4g00942 407 CDD STKc_MAP3K-like 96 351 - -
Spst4g00942 407 ProSitePatterns Protein kinases ATP-binding region signature. 96 117 IPR017441 GO:0005524
Spst4g00942 407 Pfam Protein tyrosine and serine/threonine kinase 92 351 IPR001245 GO:0004672|GO:0006468
Spst4g00942 407 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 354 - -
Spst4g00942 407 MobiDBLite consensus disorder prediction 44 71 - -
Spst4g00942 407 SMART serkin_6 90 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00942 407 Gene3D Phosphorylase Kinase; domain 1 79 169 - -
Spst4g00942 407 Gene3D Transferase(Phosphotransferase) domain 1 174 371 - -
Spst4g00942 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Spst4g00942 407 SUPERFAMILY Protein kinase-like (PK-like) 85 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00942 Spst-Chr4 39160654 39164957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00942 78 404 MAP Kinase Kinase Kinase AT5G01850 72.805 9.17e-179 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst4g00942 PK_Tyr_Ser-Thr 7.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00942 - - gmx:100816708 643.654