Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00928 ATGGAAAGTAAAGTGAGGGCAAATGAGAGATTGTTCTGCTTCGAAAGAAATTCTATTCAACAACTGAATTGTGTACACATGATGGGGTGTTTCACTGTCCTGAAATACAAGAAGAAAAAGATCAATAAAATCCGATACACAAAATGTGTCAGCCACAATGAACATTTTCCTACAGTACTACCTGAACCTCAAACTCATACTCGTTCCCTGCAGTCTGCACCTCCTAGTTTTAGGAACAGAGTGAAATCTATTCACCCCATTAATAAAGTCACCAATCACAGAGCACGGGCATTATCTGCTCCATCAGCTCTTGATGTGGCTAAACAATATACTCTTACTACAGTAGAGTTCGAGGAACAAGAGGAATCAAGATACGATGTGGGATCGCTGAAGGGGCAGCATTCATCTAGTCCACAACCTTTACCTCTTCCATCACACCAGGGTGGTGGTGAATTGAAAGTTACTACTAGCAGCTTTAAGTCAGGAATAGCTGGTGCTTCTCTGTACGCTCCAGATGCAGCAGAACAGGATGCTTTGGCCTCAGTTGAGGATGAGGAACAAGAGTCTAAACACCTAGTTGGATTGGTGAAGGATCATTCTTCATCTAATTCACAGCCTTTGCCTCTTCCATCTCGTCAGGGTGGTGGTAGTGCATTGAAGGCTAACGTCAGCTTTAAGTCAGGGATGGCTAGTGCTCCTCTATATGCTTACGGACCTTTGCCTCTTCCACCAACTGGGTTGCTTAGAAACTTTCCGCTTGAGGAGATTGCTGCTGCTTGTCACAACTTCTCTTCAGATCGATGCATGTCTGAATGTCTTTCTTCTACCATATATAGCGCTTCATTTGGTGATGATGTTTCAAGTGCAAAGAAGTTTGAAGCCACTGTCATCCGCCTTCATTCATCAGCTCAGGGATTTAAGGAATTCATTACTGATGTTAATATCCTCGCATCTTTGCAACATCCGAACCTCTGTAAATTGCTAGGATTTCATTCACGTGATGATTCTGAATCAAGGATGTTGGTTTATGAGAGGCTATGCCATGGAAGCTTGGACCACCAGTTGTTTGGGAGATCTGATGGCCCTTCAATTGATTGGAACTCGCGAATGAAAGTTGCCATATGTGCTGCACAGGGTCTTATTTTCTTGAATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAGCTGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCTGGGTATGGTTGTGTTGGACGAATTCCCGATGAAGAGATTTCAAGTAGTTCATATGCTGTTGGAAACCTGTCAGTGGAAACATTGGAAAGAGGAATTCTTACTCCTAAGAGCTATGTTTGGGGTTTTGGAATTATTCTTTTAGAGCTACTTACTGGCAAAAAGAATCTTGATAGTCATCACCCCAAGGAAGAGAGGAACTTGGTCAAGTGGAGCCGGCCTTTTCTGGCGGATGATTTTCGACTATCACTGATTATGGATCCTCAACTTAAAGGTCGCTTTCCTCCCAAAGCAGCAAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCCACCATGAGAACCATTGTTGAGCAGCTCAAAGTGGTTCAAGATATGAAGTACTCATGTTGGTTCCCACTGCAAGAGCCTGTAAAACAAATGTCAAGATCACCAAGTCTTAATGGTATCAAATGTCTCACACCTACGTTGAGTTTCTCTCCCTCAACAGCACCAATTGCCAGACCATCTGTTTCATCTCCAAGATGGTGTGCTGTTCCCACGTTGCATCTTCCTCTTGGTGCCTGTTCCTCCATTTTCTGA 1836 0.433 MESKVRANERLFCFERNSIQQLNCVHMMGCFTVLKYKKKKINKIRYTKCVSHNEHFPTVLPEPQTHTRSLQSAPPSFRNRVKSIHPINKVTNHRARALSAPSALDVAKQYTLTTVEFEEQEESRYDVGSLKGQHSSSPQPLPLPSHQGGGELKVTTSSFKSGIAGASLYAPDAAEQDALASVEDEEQESKHLVGLVKDHSSSNSQPLPLPSRQGGGSALKANVSFKSGMASAPLYAYGPLPLPPTGLLRNFPLEEIAAACHNFSSDRCMSECLSSTIYSASFGDDVSSAKKFEATVIRLHSSAQGFKEFITDVNILASLQHPNLCKLLGFHSRDDSESRMLVYERLCHGSLDHQLFGRSDGPSIDWNSRMKVAICAAQGLIFLNEEGPFQAMYNEFSAANIQIDKDFSAKLSGYGCVGRIPDEEISSSSYAVGNLSVETLERGILTPKSYVWGFGIILLELLTGKKNLDSHHPKEERNLVKWSRPFLADDFRLSLIMDPQLKGRFPPKAARAVADIAQRCLQKEPSERPTMRTIVEQLKVVQDMKYSCWFPLQEPVKQMSRSPSLNGIKCLTPTLSFSPSTAPIARPSVSSPRWCAVPTLHLPLGACSSIF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00928 611 MobiDBLite consensus disorder prediction 196 216 - -
Spst4g00928 611 Pfam Protein tyrosine and serine/threonine kinase 298 538 IPR001245 GO:0004672|GO:0006468
Spst4g00928 611 MobiDBLite consensus disorder prediction 121 154 - -
Spst4g00928 611 Gene3D Phosphorylase Kinase; domain 1 244 344 - -
Spst4g00928 611 SUPERFAMILY Protein kinase-like (PK-like) 244 549 IPR011009 -
Spst4g00928 611 MobiDBLite consensus disorder prediction 196 211 - -
Spst4g00928 611 ProSiteProfiles Protein kinase domain profile. 263 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00928 611 MobiDBLite consensus disorder prediction 129 143 - -
Spst4g00928 611 Gene3D Transferase(Phosphotransferase) domain 1 346 549 - -
Spst4g00928 611 PANTHER OS01G0588500 PROTEIN-RELATED 196 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00928 Spst-Chr4 38778210 38781107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00928 238 542 Receptor kinase-like Gene Family AT4G02010 36.013 2.32e-51 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Spst4g00928 PK_Tyr_Ser-Thr 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00928 - - aprc:113849641 836.639