Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00906 ATGGCTGGAAGTTCTCACCAAAGGGTCAACATCTGTTTTTTCTTATGTCTTGTTGGGATAGTTTCAGCTTCAGAATATTCAACTTCTTCATCATCAACAACTAGTTCTGGCACTTCCTCCAATTATCTGTTAAACCCCTTCTTCTATGCTTTCAAGTGCCCCCAAGCCCTTGATACCATTAAGAAACAAGTAACCAATGCTGTGTCGATAGAGCCTCGCATGGGTGCATCCTTGCTTCGTCTTCATTTCCATGATTGCTTTGTCCAAGTTTCACGGTTGCTTGTAAACGGATGTGATGCATCGGTTTTATTAGTGGACACAGCAAGTTTCAAGGGCGAACAAGGTGCCTTACCAAACGTGAATTCTCTAAGGGGTTTTGGAGTCATAGAGAACATAAAAGCTGAACTAGAGCGTGAGTGCCCCGGCGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCTGCAAGGGATTCTGTTGTTGCTCTTGGTGGACTTGGATGGCCTGTTAGCTTGGGCAGAAGGGACTCAACCACTGCAAGTTTAAGTGGAGCTAACTCTGATTTACCAGCTCCCTTTCTGGATCTTAATGGCCTTATCACTGCTTTCCAAAAGAAGGGTTTCACAGTAAATGAAATGGTGGCTTTATCAGGTGCTCACACAATAGGCAGTGGGAGGTGTGTACTCTTCCGATCAAGGATTTATAACGAGAGCAACATAGATCCCACGTATGCAAACCTAATGAGGGCCAATTGCCCCGAGATTGGTGGTGATAGCAACTTGTCTCCCATAGACATTACCACTAAAGACGTGTTCGATAGTGCTTACTACACAAATTTAATTAACAAAAAGGGTCTTTTCCACTCTGATCAACAACTCTTTAGTGGCGGTTTAACGGCCTCTCAGGTCAATGTTTATTCCACGTTCCCGTTAATCTTCAAATTCGATTTTTCTAACGCCATGCTCAAGATGAGCAACCTTAGCCCACTCACCGGCGTGCAGGGTCAGATCAGAAAAGTGTGCAGCAGCGTGAATTGA 1032 0.4457 MAGSSHQRVNICFFLCLVGIVSASEYSTSSSSTTSSGTSSNYLLNPFFYAFKCPQALDTIKKQVTNAVSIEPRMGASLLRLHFHDCFVQVSRLLVNGCDASVLLVDTASFKGEQGALPNVNSLRGFGVIENIKAELERECPGVVSCADILAVAARDSVVALGGLGWPVSLGRRDSTTASLSGANSDLPAPFLDLNGLITAFQKKGFTVNEMVALSGAHTIGSGRCVLFRSRIYNESNIDPTYANLMRANCPEIGGDSNLSPIDITTKDVFDSAYYTNLINKKGLFHSDQQLFSGGLTASQVNVYSTFPLIFKFDFSNAMLKMSNLSPLTGVQGQIRKVCSSVN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00906 343 FunFam Peroxidase 188 322 - -
Spst4g00906 343 CDD secretory_peroxidase 44 342 IPR033905 GO:0004601|GO:0042744
Spst4g00906 343 Gene3D Peroxidase, domain 2 188 322 - -
Spst4g00906 343 Pfam Peroxidase 61 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PANTHER PEROXIDASE 72-RELATED 42 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Spst4g00906 343 Gene3D - 48 340 - -
Spst4g00906 343 FunFam Peroxidase 47 194 - -
Spst4g00906 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Spst4g00906 343 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 ProSiteProfiles Plant heme peroxidase family profile. 43 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00906 343 SUPERFAMILY Heme-dependent peroxidases 44 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00906 Spst-Chr4 38321698 38324060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00906 48 343 Peroxidase AT5G05340 56.376 2.05e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00906 K00430 - gmx:100811432 459.144