Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00903 ATGGATTCTAGGAGGCGAAAAAAAGCATCAACGCAACGCAAGTTGCAACAACTTCGATCGGTCACAAATTCTAGTGCTGTTAACAAAGCCTCAATTATCGTGGATGCCACAAGATACATAGAGGAGCTGAAGCAAAAAGTGGATGGATTGAACTCTGAGCTTGGACCCGCTGAATCATCAATCTCCCAAGACGACCTACCCATGGTCACCGTAGAAACCCTAGAAAGGGGTTTCCTCATTAATGTGTTTTCAGAAAGAAACTGCCCCGGCATGCTTGTGGCAATACTCGACGCCTTCGAAGAACTGGGACTTGATGTACTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTGAAGCTGTTGGAGGAGAAAGTCAAGAGAATGAAAGCATTGATGCACAAGTGGTGAAACAAGCAGTGATGCAAGCAATCCAAAACATGGATTAA 450 0.4467 MDSRRRKKASTQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGPAESSISQDDLPMVTVETLERGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVMQAIQNMD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00903 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 146 - -
Spst4g00903 149 CDD ACT_UUR-ACR-like 89 145 - -
Spst4g00903 149 Gene3D - 1 65 IPR036638 GO:0046983
Spst4g00903 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 10 58 IPR036638 GO:0046983
Spst4g00903 149 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00903 Spst-Chr4 38068710 38070226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00903 14 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.082 2.58e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00903 - - gmx:100499821 269.626