Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00878 ATGCAAGATGTGGAAATCAAGAAGCTTAAACAAAAGGCTACGGAAGCTAGTGCCCTTGCCGCAGTGGAATCTTCTAATCACAGAGTAACAAAAGAATTTGTTGAATCTACCATACATCAGATGAAGGAAATGACTGACAAATTGCCTGGAGAAATTACAGAAAGTAAGAATTTGAGATCTGTTCTTAATCGAGTTAAAAATTTTCTTCAAGAAACGTCAGAATTTGAAACATCTTCATCACCAAAGTTGGAGACTAAGCAAAAGGATGAACATGATAGACCTACCTCAAATAGTGACTCTTATTCCAAATTACAAATATATAGAGTTGAAGAAAATGTGGATGCCAATCTTTCTCATGATAAAGAAAATTTCCTTGAAGAAAGAAATAAACCTAGTACAGATACTTGCAAAGATAGAGGAAATTCTCTCAAAGAAAGTGATGAACCAAACTCAGAAATCGAGTACAAAAATGCACCTCGTACATTTTCCTCAACTAGTGATGGTTCTGAAATGTTAGATGATAGACTAGAGGAGAATGCTGAGGTTGCAATAGTTGATCAATCTGAAGAAGCAGAAGAAGATGTCTTTCAAGAATGTATTGGATCACGTTCAAGAATTGACAGAACACCGTCTTCAGAAAACTCAAACAATGGTTCAAGATCATTAGACTCTTCACGACTCGGAAAACAGGGAGAAGAACAAATTATTGAAAAATTTGATTGTGGAGTTTATGTGATGCTCGTGTTACAGTCTGATGGTGCCAAAATTTTTAAACGAGTTAAATTCAGGTAA 792 0.3523 MQDVEIKKLKQKATEASALAAVESSNHRVTKEFVESTIHQMKEMTDKLPGEITESKNLRSVLNRVKNFLQETSEFETSSSPKLETKQKDEHDRPTSNSDSYSKLQIYRVEENVDANLSHDKENFLEERNKPSTDTCKDRGNSLKESDEPNSEIEYKNAPRTFSSTSDGSEMLDDRLEENAEVAIVDQSEEAEEDVFQECIGSRSRIDRTPSSENSNNGSRSLDSSRLGKQGEEQIIEKFDCGVYVMLVLQSDGAKIFKRVKFR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00878 263 Pfam Transcription factor regulating root and shoot growth via Pin3 233 262 IPR013591 -
Spst4g00878 263 MobiDBLite consensus disorder prediction 81 97 - -
Spst4g00878 263 Pfam Transcription factor BRX N-terminal domain 23 57 IPR027988 -
Spst4g00878 263 MobiDBLite consensus disorder prediction 70 104 - -
Spst4g00878 263 MobiDBLite consensus disorder prediction 118 154 - -
Spst4g00878 263 MobiDBLite consensus disorder prediction 118 229 - -
Spst4g00878 263 MobiDBLite consensus disorder prediction 204 225 - -
Spst4g00878 263 ProSiteProfiles BRX domain profile. 233 263 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00878 Spst-Chr4 36948840 36950289 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00878 - - gmx:100798841 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00846 1 10786029 10791680 Spst4g00878 4 36948840 36950289 PCT