Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00844 ATGGCTTCTCTTCTCCCTCCAACTCCAACTGCAACTGCAATTTCCACACTTAAACACAGCCAAATGACCTCTCCCTTGAAACTCACCACTCCACACAATGCTACTTTCTCGCCAAACTCAAACCATCGTTTGAAGAGCAACTCTGCAAAGTGCCATGCACTGTTTGACGAGGTGGCCAAAGGGTTGGTGGAGAACAGTGTTGGCGTGGACCATTTTCAAAGTATCCAATCAGGAATAGTGCAGTTTGAAAGAGTGACTGAAGGCTTATCTGACATGCAGAGATGGGGGGTTCTCGTGTTTGGTGGGTTGACGTGGATTTACTTGACTGCGAGGCCAGGTGTTCTTGTTGGTGCCATTGATGCTTACCTTTTGGCCCCTCTTCAACTGGGTTTCGACAGTTTGGCTGGAAGGAGGAACTTGAAAAGGAGTGACTTTGTGATCGGAGATAAGCTTGGTGAAGGGTCTTTTGGTGTTGTCTATTCGGGTGTTTTGGTTCCGAAGAATGGGAATGGGAGTGTGGATATGGTGCAGAAGAGGGGGAGAGGCAAGGCAACACAGGTAGAAGCCAAGTCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATCCAAGGCGCTGAGGAGTTTGGTGATTATGAGGAGTGGTTCAATTACAGGCTATCTAGGGCTGCTCCCGAAACATGTGCTGAATTCCTTGGAAGTTTTGTGGCTGATCAAACAAATTCACAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGTACTCTTGGTGATTACATGAAGGATCGCAACTTTCCTTCAAACTTAGAATCTGTGATGTTTGGACGTGTCTTGCAAGGTGTTGACTCTTCGAGACGAAATGCATTGATCATCAAACAAATAATGCGCCAGATCATTACGTCTCTTAGGAAAATTCATGATACTGGCATTGTTCACAGGGATGTAAAGCCAGCCAACTTAGTGGTTACCAAACGAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACTTGCGGATTGGAAAGAATTATGTTCCCAACCGTACCCTTTTGGATCCTGACTACTGCCCCCCTGAATTATATGTCCTCCCAGAAGAAACACCAAGTCCACCACCAGAACCAATTGCTGCTTTCCTTTCACCAATCCTTTGGCAGTTAAACAGCCCCGATTTGTTTGATATGTATTCAGCTGGGATTGTACTCCTTCAAATGGCAATACCATCTTTAAGGTCCTCTGCTGCTTTGAAGAATTTCAACTTGGAACTGAAAAACTGCGGATATGATTTGAAAAAATGGAGGGAGTATACTCGCATCAGACCTGACTTCCAAATTCTAGATAGTGAATCTGGTAGAGGGTGGGACTTAGCAACGAAGCTTGTATCTGAGAGAGGTTCCCTAAGAAGAGGACGTCTCTCTGCTGCCGCAGCTCTGAGGCATCCTTATTTTCTTCTGGGTGGTGATCAGGCAGCTGCAGTCCTTTCAAAACTAAGCTTAAGCAGAAAGTGA 1527 0.4506 MASLLPPTPTATAISTLKHSQMTSPLKLTTPHNATFSPNSNHRLKSNSAKCHALFDEVAKGLVENSVGVDHFQSIQSGIVQFERVTEGLSDMQRWGVLVFGGLTWIYLTARPGVLVGAIDAYLLAPLQLGFDSLAGRRNLKRSDFVIGDKLGEGSFGVVYSGVLVPKNGNGSVDMVQKRGRGKATQVEAKSKDKVILKKVKVGIQGAEEFGDYEEWFNYRLSRAAPETCAEFLGSFVADQTNSQFTKGGKWLVWKFEGDRTLGDYMKDRNFPSNLESVMFGRVLQGVDSSRRNALIIKQIMRQIITSLRKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSSAALKNFNLELKNCGYDLKKWREYTRIRPDFQILDSESGRGWDLATKLVSERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSRK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00844 508 SUPERFAMILY Protein kinase-like (PK-like) 141 490 IPR011009 -
Spst4g00844 508 CDD STKc_SNT7_plant 149 489 - -
Spst4g00844 508 Gene3D Transferase(Phosphotransferase) domain 1 287 491 - -
Spst4g00844 508 SMART serkin_6 145 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00844 508 Pfam Protein kinase domain 296 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00844 508 ProSiteProfiles Protein kinase domain profile. 145 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00844 508 Gene3D Phosphorylase Kinase; domain 1 132 256 - -
Spst4g00844 508 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 43 508 - -
Spst4g00844 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00844 Spst-Chr4 36118924 36121638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00844 145 345 MAP Kinase Kinase Kinase AT3G13530 24.510 1.79e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Spst4g00844 Pkinase 4.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00844 - - gmx:100788727 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00901 1 11301022 11303988 Spst4g00844 4 36118924 36121638 PCT