Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00843 ATGGAACGTAATGCTGCAAACATCCCCCCCTCTGAAATTCCCCATTCTCGCCACAACAGAGTTCGTCCCAAAAGCAGTGTCCAATTTGATGATAACATCATCATACATGAGAACAATGCCAATCTCATCTATATTAATGATCCCATCAAGACTAATGAAAAATATGAGTTTGCTGGGAATGAGATCCAAACTAGCAGATACACTCTTCTCACCTTCTTGCCCAAGAATCTCTTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCCATTGCTTGCCTGAATCAGCTTCCTCCACTTGCTGTTTTCGGCCGAACCGTGTCCCTTTTCCCCCTTTTATTTGTGCTCTGCGTCACTGCTATCAAGGATGCCTACGAGGATTGGCGCAGGCACCGATCGGATTGCTATGAAAACAATCGAGAGTGTCTGGTTCTTCAATCAGCTCAGTTCTGCTCCAAGAGATGGAAAAATATACAGGCCGGTGATGTGGTTCAAATCTTTGCCAATGAGACGATTCCTGCTGACATGGTCTTATTGGGGACAAGTGATCCGAGTGGGGTTGCCTATATTCAGACAATGAATTTGGATGGGGAATCGAATTTGAAGACCAGGTTTGCCAAGCAAGAAACAGCTTCAGCAGTGTTCCCAGATGCTTGTGCTGTCGCTGGAGTTATTAAATGTGAGCCACCAAATCGGAACATTTATGAGTTTACTGCCAACTTGGAGTTCAATGGCCATAAGATTCCCCTTAACCAGTCAAACATTGTACTGCGTGGTTGCATGCTGAAGAACACGGCTTGGATAATTGGTGTTGTGGTTTATGCAGGACAGCAAACAAAAGCAATGATGAACACTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAAACTTTTTGGTTGTCAGTTTTTCTTTTTATCATGTGCGCAGTTGTTGCCCTTGGGATGGGTTTCTGGCTGGTACGCCACAAGGATCAGCTTGACACCTTGCCTTACTACAGAACAACATACTTAAACAATGGGCCAAATGAGGGAAAGAATTACAGATATTATGGGATACCAATGGAAACATTCTTCTCATTTTTGAGCTCTATTATTGTGTTTCAGATAATGATACCAATATCTCTATATATCACAATGGAGTTAGTTCGTTTGGGTCAGTCATACTTCATGATAGAGGACAGGGATATGTATGATACTAACTCTGAATCAAGGTTCCAGTGTAGATCATTTAACATAAATGAAGATTTGGGTCAAATACGCTATGTGTTCTCCGATAAGACAGGAACTCTGACAGAAAACAAAATGGAGTTTCAGAAAGCCAGTGTACACGGAAAAAGCTACGGGAGCTCCTTGCTTACAGCTGATAACAATACAGCAGCAGCCAATAGTGGTAAACGAAGACTGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTAATGGCATTGTTGCAGAAAGACTCAAATTTAGATGAAAGAATTTCCGCTCATGAGTTTTTCCTTACATTGGCTGTTTGTAATACTGTGATCCCCATTGGTAGTAGTAATAAAGTTTCCACTTGCGGAAAAGAAGAACCAGATGAAGACATAGAAAGTATTGATTACCAGGGAGAGTCTCCTGATGAACAAGCTCTAGTTTCAGCTGCCTGTGCATATGGATATACTCTATTTGAGCGAACCTCCGGAAATGTTGTTGTTGATGTTAATGGTGAGAAACTGAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTACGAAAGAGGATGTCTGTTGTTATCCGGTTTCCTAATAATATAGTTAAGGTGTTGGTTAAAGGTGCCGATACTTCAATGTTTAGCATTTTAGCACCTAACTCTGAAGGCAACTACATACAACATGAAACTCAGAATCACTTAACTGAATATTCTATGCAAGGTTTAAGAACTCTTGTAATTGCCTCCAAGAATCTTTCAGATGCCGAATTTGAGGAGTGGCAAAACATGTATGAAGATGCGAGCACTTCATTGACTGATCGAGCTTCAAAACTACGTCAATCAGCATCTCTTTTAGAATGCAACCTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTGCAGGAGGGTGTACCTGAAGCCATTGAGTCCATGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAGTGGAGATATGCAACAGATAATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAAGCTCTTGACTGAGGCTATAGCTAAGTATGGGTTGAAATCTTCAAGTAGAGAACATCTGATTCTGAAGTACAAAACTGGTTCTGGACATTGTCGCTCTGATATCCACAATGATGATGGCTTGCCCAAGAGGAATGGAGGAAAGGAAGGAGCTACTGCTCCCTTAGCCCTCATAATTGATGGAACCAGTTTGGTTTATATTTTGGAGAAGGAACTACAGGTTGTACTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGATGATCTGACATTAGCAATAGGGGATGGGGCAAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGTCAAGCTGTAATGGCATCAGATTTTGCCATGGGGCAATTCCAGTTCTTGAAAAGATTGCTTCTGGTACATGGCCACTGGAATTATCAGCGTGTCGATATCCAGATAGCTAGAGAAGCTGAGACAATGAGAAAACAGCATGATGATTTGCAGTCAAAGCCACCGGCTTCCGAATAG 2850 0.4221 MERNAANIPPSEIPHSRHNRVRPKSSVQFDDNIIIHENNANLIYINDPIKTNEKYEFAGNEIQTSRYTLLTFLPKNLFIQFHRVAYLYFLAIACLNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDCYENNRECLVLQSAQFCSKRWKNIQAGDVVQIFANETIPADMVLLGTSDPSGVAYIQTMNLDGESNLKTRFAKQETASAVFPDACAVAGVIKCEPPNRNIYEFTANLEFNGHKIPLNQSNIVLRGCMLKNTAWIIGVVVYAGQQTKAMMNTAASPSKRSKLESYMNRETFWLSVFLFIMCAVVALGMGFWLVRHKDQLDTLPYYRTTYLNNGPNEGKNYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDTNSESRFQCRSFNINEDLGQIRYVFSDKTGTLTENKMEFQKASVHGKSYGSSLLTADNNTAAANSGKRRLKLKSEIAVDSELMALLQKDSNLDERISAHEFFLTLAVCNTVIPIGSSNKVSTCGKEEPDEDIESIDYQGESPDEQALVSAACAYGYTLFERTSGNVVVDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNIVKVLVKGADTSMFSILAPNSEGNYIQHETQNHLTEYSMQGLRTLVIASKNLSDAEFEEWQNMYEDASTSLTDRASKLRQSASLLECNLKLLGATGIEDKLQEGVPEAIESMRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRKLLTEAIAKYGLKSSSREHLILKYKTGSGHCRSDIHNDDGLPKRNGGKEGATAPLALIIDGTSLVYILEKELQVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVDIQIAREAETMRKQHDDLQSKPPASE 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00843 949 NCBIfam phospholipid-translocating P-type ATPase 57 924 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst4g00843 949 Gene3D - 694 907 IPR023214 -
Spst4g00843 949 Pfam E1-E2 ATPase 141 388 - -
Spst4g00843 949 FunFam Phospholipid-transporting ATPase 698 907 - -
Spst4g00843 949 Pfam Cation transport ATPase (P-type) 532 620 - -
Spst4g00843 949 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Spst4g00843 949 FunFam Phospholipid-transporting ATPase 115 285 - -
Spst4g00843 949 SFLD p-type atpase 414 918 IPR044492 -
Spst4g00843 949 Gene3D - 120 287 - -
Spst4g00843 949 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Spst4g00843 949 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Spst4g00843 949 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 922 IPR023298 -
Spst4g00843 949 Gene3D - 543 675 IPR023299 GO:0000166
Spst4g00843 949 FunFam Phospholipid-transporting ATPase 542 685 - -
Spst4g00843 949 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 923 IPR032630 -
Spst4g00843 949 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 711 IPR023299 GO:0000166
Spst4g00843 949 NCBIfam HAD-IC family P-type ATPase 363 456 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst4g00843 949 NCBIfam HAD-IC family P-type ATPase 838 923 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst4g00843 949 SUPERFAMILY HAD-like 418 912 IPR036412 -
Spst4g00843 949 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Spst4g00843 949 MobiDBLite consensus disorder prediction 1 23 - -
Spst4g00843 949 SFLD C1.7: P-type atpase like 414 918 - -
Spst4g00843 949 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 923 - -
Spst4g00843 949 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00843 Spst-Chr4 36075950 36085752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00843 35 927 Primary Pumps ATPases AT5G04930 56.402 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00843 K14802 - gmx:100788740 1555.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00895 1 11270520 11276161 Spst4g00843 4 36075950 36085752 PCT