Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00841 ATGGATAATAGAAAGGTATTGGAGGAGCTTGTGAGAGGTCATGAGTTTGCCACTCAACTTCGACTACTGATTAATGGAAAAGATGAGTCTGCAAAAGCCACCCCATTTGTCCAAAGTCTTGCCAAGAACGTGCTTAGATCCTTCACCAACACCCTCTTCTTCTTGGACAAGTATCCCTCTTACGAGCTTTCCAATCTTTTCACTCCCACCAAATCTGAGGACTCCCAAGAAAATTGCCAGAGTCTCACCAGTTTCAAGAACAGAAGAGGCTGCTACAAGAGAAAAAGAAATACACAAGAATGGGAGAAAGTTTCTGAAGCTCCAATAGTTGATGGCCACCACTGGAGAAAGTATGGCCAAAAAGAGATCCTCAAAGCCAAATACTCAAGAAACTATTACCGGTGCACTCACAAGTATGATCAGAATTGTCAAGCAACAAAACAAGAGCAAAGAATTCAAGAGGATCCTCCTTTGTATAAGACCACCTATTTTGGCCGCCACACATGCAATGACTTGCCAAACTCTGAAATCATACTTGATTCCAATCATTCTCCTTTTGACACTTCCATACTGCTAAGCTTCAACAACACCTTCCCTACTCCAACCAAGCAAGAGTGCCCCTTTTTATCATCCTCATCATCTTTTAATCCCTCACCATCAGTTGCCAAAGAGGAGACAATCCCCTCATCTTCCTCCTATGATTACATGATCTCCCCAGAACCCATTTTAGATCATTCTTCCTGGCACAATAATGCCACTCTACCACTCGATCACTGGGATGTTATGTCTTCTGCTTTGTGTGATTCTGTTGACCTTGATGATGTCAAACTTTTGTTGGATTTTGATGGTTAA 852 0.4214 MDNRKVLEELVRGHEFATQLRLLINGKDESAKATPFVQSLAKNVLRSFTNTLFFLDKYPSYELSNLFTPTKSEDSQENCQSLTSFKNRRGCYKRKRNTQEWEKVSEAPIVDGHHWRKYGQKEILKAKYSRNYYRCTHKYDQNCQATKQEQRIQEDPPLYKTTYFGRHTCNDLPNSEIILDSNHSPFDTSILLSFNNTFPTPTKQECPFLSSSSSFNPSPSVAKEETIPSSSSYDYMISPEPILDHSSWHNNATLPLDHWDVMSSALCDSVDLDDVKLLLDFDG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00841 283 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g00841 283 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 189 IPR044810 GO:0003700
Spst4g00841 283 Gene3D WRKY domain 97 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst4g00841 283 ProSiteProfiles WRKY domain profile. 104 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g00841 283 Pfam WRKY DNA -binding domain 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g00841 283 SUPERFAMILY WRKY DNA-binding domain 107 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00841 Spst-Chr4 36054793 36056036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00841 5 181 WRKY Transcription Factor Family AT3G56400 37.186 1.02e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst4g00841 WRKY 2.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00841 - - var:108346831 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00894 1 11261947 11263394 Spst4g00841 4 36054793 36056036 PCT