Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00833 ATGGGCTCTTCAACACTTTTCTTGCTTCTTCTCATTTCTACTCTTTGCCATAATTTCCATCATTCTTCTTCCTTCCATCTTTCCGTTGAGAACCTCAAAGAAGATGTAATGGTGTCATCACCCAAAGCAACATTCACAGTAGGCTTTTACGCCGTCGGAGAAAACGCTTTCTGCTTCGCAATATGGTACTCCCAATCACCCAATACCGTTGTTTGGATGGCCAACCGGGACCACCCGGTGAACGGAAAACGCTCCTCGCTCTCCCTTCTCAAGACCGGTAACCTGGTACTCACCGATGCCGACCAGTTCCAAGTCTGGTCCACCAACACCGCCACCTCATCGAAGCAAGTCCGGTTGCATTTGTACGACACCGGCAACCTCGTACTCATGGACACCTCCAACGTTGTTATTGTTGCTCTGTGGCAAAGTTTCGATTTCCCAACCGACACGCTTCTTCCACATCAACCTCTAAGAGGGAGTACCAACCTCGTTTCCTCGAGAAGTGGGAACAACTATTCCTCAGGTTTCTACAAACTTTTCTTCGACTTCGAGAACGTTCTACGTCTCACGTACCAGGGTCCTCGAGTTTCCAGCACTTACTGGCCATACGCTTGGCTTCTGAGCAATAATTTCGGCAATGGTAACGGCAATAATGGTAGATCCATTTTCAACGATAGCAGGGTTGTTGTCCTGGATGATTTGGGCTATCTGATTTCTTCTGATAACTTCACTTTCAAAACAAGTGACTACGGCATGAAACTCGTACGCAGATTGACCCTGGATCACGACGGCAATGTTCGTTTGTATGGCATGAAAGACGGAGAAGACAAGTGGTCTGTGTCAGGAATATTTCGGCCACAACCTTGTTTAATTCATGGGATTTGTGGACCCAACAGTTTTTGCAGCTATGAGCCAACAAGTGGAAGAAAATGTTCCTGTTGTCCAGGACATAGATGGTTTGACAGTGAAGACTGGTCTCAAGGTTGCGTACCCAATTTTCAACTTGTGTGTAACAATAACACTGAGCAAGAATCTCGCTTTCTAAGCTTACCTGGAGTTGATTTTTACGGATATGACTATGGCAACTTTCAGAATCACACGTACCAACAATGTGTGAGTCTGTGCTCGCGGTTGTGCGAATGTAAAGGGTTTCAATACAGCACTTCGAGGCAAAGTGGTGTTAATGGTCAGTGCTATCTGAAGACACGGTTGTTAAATGGCCATCGTTCACCGAGTTTCACCAACTCATTCTTTCTGAGAATGCCTTTGTCTCTCCATGACTATGACGATAGTCCTATCAATAATGGTTTGCTTTGTGGAAGAAATAGTGGAGGAGTGAAAGTTCTTGAGAGACCTTACGTAGAAGAAAAAGAAAATGAGTTGGTGAAGTTCATGTTGTGGTTAGTGATTGCCTTCGGAGGAATTGAGGTCGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAATGACGTGACGTTACGCAAAGAAGGTTATGTTCTTGCAGCTGCAACGGGGTTTAGGAAATTCAGTTACTCTGAACTGAAACAAGCCTCTAAAGGTTTCAGTGAAGAGATTGGAAGGGGTGGTGGAGGTACCGTGTATAAAGGTGTCTTGTCTGATGATCGAATTGTGGCAATAAAAAGACTATATGAAGTAGCAAACCAGGGAGAAAGTGAGTTCCTGGCTGAAGTAGGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGCATGTTGGGGTATTGCGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAGAATATATCATCAAGTTCAAATATACTTGACTGGAGTAAAAGGTATAACATTGCCCTGGGAACAGCAAGGGGTCTGGCATACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAGAATATACTTCTTGACTCTGATTATAAACCGAAGGTAGCGGATTTTGGCTTGTCTAAGCTACTTAACCAAAACAATCTTAACAATTCAAGCTTCTCAAGGGTAAGAGGGACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCAATCACTTCAAAGGTGGATGTCTACAGCTATGGCATTGTCGTCTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAAATCACAGAATTAGAAGCAGAGTCACCTCATCCTGAGAGGTTGGTGACATGGGTGAGGGAGAAGAGGAAGAAAGGATCAGAAGTGGGACCATCTTGGGTGGATGAGATTGTGGACCCTGCTTTGGGATCACACTATGACATGAATGAGACGGAGATATTGGCAACCGTGGCTTTGGAATGTGTACAGGACGACAAAGAGGTAAGACCCAACATGAGTCATGTTGTTGAGAGGCTCCAAAGTGATGAACATTAG 2427 0.4466 MGSSTLFLLLLISTLCHNFHHSSSFHLSVENLKEDVMVSSPKATFTVGFYAVGENAFCFAIWYSQSPNTVVWMANRDHPVNGKRSSLSLLKTGNLVLTDADQFQVWSTNTATSSKQVRLHLYDTGNLVLMDTSNVVIVALWQSFDFPTDTLLPHQPLRGSTNLVSSRSGNNYSSGFYKLFFDFENVLRLTYQGPRVSSTYWPYAWLLSNNFGNGNGNNGRSIFNDSRVVVLDDLGYLISSDNFTFKTSDYGMKLVRRLTLDHDGNVRLYGMKDGEDKWSVSGIFRPQPCLIHGICGPNSFCSYEPTSGRKCSCCPGHRWFDSEDWSQGCVPNFQLVCNNNTEQESRFLSLPGVDFYGYDYGNFQNHTYQQCVSLCSRLCECKGFQYSTSRQSGVNGQCYLKTRLLNGHRSPSFTNSFFLRMPLSLHDYDDSPINNGLLCGRNSGGVKVLERPYVEEKENELVKFMLWLVIAFGGIEVVCIFMVWCFLFRNDVTLRKEGYVLAAATGFRKFSYSELKQASKGFSEEIGRGGGGTVYKGVLSDDRIVAIKRLYEVANQGESEFLAEVGIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMENGSLAQNISSSSNILDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVADFGLSKLLNQNNLNNSSFSRVRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVQITELEAESPHPERLVTWVREKRKKGSEVGPSWVDEIVDPALGSHYDMNETEILATVALECVQDDKEVRPNMSHVVERLQSDEH 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00833 808 Gene3D Hepatocyte Growth Factor 348 417 - -
Spst4g00833 808 Pfam D-mannose binding lectin 69 158 IPR001480 -
Spst4g00833 808 ProSiteProfiles Protein kinase domain profile. 520 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00833 808 Gene3D - 27 146 IPR036426 -
Spst4g00833 808 SMART blect_4 29 147 IPR001480 -
Spst4g00833 808 Pfam S-locus glycoprotein domain 242 317 IPR000858 GO:0048544
Spst4g00833 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 202 IPR036426 -
Spst4g00833 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Spst4g00833 808 PANTHER OS07G0415500 PROTEIN 6 805 - -
Spst4g00833 808 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Spst4g00833 808 FunFam S-receptor-like serine/threonine-protein kinase 489 595 - -
Spst4g00833 808 Pfam Protein kinase domain 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00833 808 FunFam Serine/threonine-protein kinase 596 808 - -
Spst4g00833 808 SUPERFAMILY Protein kinase-like (PK-like) 507 801 IPR011009 -
Spst4g00833 808 SMART serkin_6 520 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00833 808 CDD STKc_IRAK 526 804 - -
Spst4g00833 808 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Spst4g00833 808 SMART ntp_6 342 421 IPR003609 -
Spst4g00833 808 ProSiteProfiles PAN/Apple domain profile. 337 422 IPR003609 -
Spst4g00833 808 Gene3D Transferase(Phosphotransferase) domain 1 596 808 - -
Spst4g00833 808 Gene3D Phosphorylase Kinase; domain 1 489 595 - -
Spst4g00833 808 CDD B_lectin 39 147 IPR001480 -
Spst4g00833 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00833 Spst-Chr4 35957302 35959864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00833 510 807 Trihelix Transcription Factor Family AT5G38560 45.183 5.09e-71 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst4g00833 Pkinase 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00833 - - gmx:100786566 1284.63