Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00830 ATGCATGTTCTCATGGCCTCTTCAACACTCAATTTGCCTCTTCTCCTTTCTCTCATCCTATTCTGTAATTTTCACCACTCTTCTTCCTTCTCTCTTTCCGTTGAGAATCCCAATGAACACATACCATCCTTACCCAAAGGAACATTCACCGCAGGCTTCTACGCCGTCGGAGAAAACGCTTTCTGCTTTGCGATATGGTACACCCGCCCACCCCACACCATTGTCTGGATGGCCAACCGGGACCACCCGGTAAACGGAAAACGCTCCACGCTATCTCTTCTCGAAACCGGTAACCTAGTACTCACCGACGCCAACCAGTTCCAAGTCTGGTCCACTAACATCATCCCCACTGTATCCAAACAACTCCGCTTACATTTGAACGACACCGGCAACCTCGTACTCCTCGACGATTCCTCCAACCTTGTTTTGTGGCAGAGCTTCGATTTCCCAACGGACACGCTTCTTCCAAATCAACCTCTCAGAGGGAGCACCAATCTCGTGTCCTCGAGAAGCGGGACCAACTACTCCTCCGGTTTCTACAAGCTCTTCTTCGACTTCGAGAATGTTCTGCGTCTCATGTACCAGGGCCCTCGAGTTTCCAGCGTTTTCTGGCCGTACGCGTGGCTTCAGAGCAATAACTTTGGTAATGGTAATAGTAATGGTAGATCCACTTTCAACGATAGCAGAGTTGTCGTGCTTGATGATTTCGGTGCCATGGTTTCTTCCGATAACTTAACTTTCAAAACCACCGATTACGGGGCGGTGCTTCAACGGAGATTGACCCTCGATCATGACGGTAATGTGAGGGTGTATAGCATGAAAGATGGAGAAATAAAGTGGTCAGTATCGTTGCTTTTTCGGCCACAACCTTGTTTTATTCATGGGATTTGTGGACCCAATAGTTATTGCAGTAATCACCCAAGAAGTGGAAGAAAGTGTTCGTGTCTTCCAGGTCACAAATGGGTTGACAGTCAAGACTGGACTAAAGGTTGCATACAGAATTTCGAACCTTGGTGCAACAACAACACTGAGCAAGAGTCTCGCTTCGTACACTTGCCTGAATTTGATTTTTATGGATATGACTATGGCTTCTATCAGAATCACACTTACAAAGAATGTGTGAATCAATGCTTGCGGTTGTGCGAATGCAAAGGGTTTCAGTACAGTTTCGGGGAAAAAGATGGTCTTGGTAGTCAGTGCTACCTGAAGACGCAATTGCTGAATGGGCATCATTCACAAGGTTTCTCGGGAGTATTCATTCTGCGACTGCCTTTGTCTCATGACTATGAGAACCCCCAACTTAGTGGTTTGGTTTGTGGGGGAAATAGTGGAGGAGTGAAAGTACTAGAGAGACCGTATGTGGAAGAAAAAGAAAATGGATCGGTGAACTTCATGCTATGGTTTGCCAGTGGCTTGGGCGGAATTGAGGTTTTGTGCTTCTTTTTGGTGTGGTGTTTTTTGTTTAAGAATAATGCTGACAAACAAGCCTATGTTCTTGCTGCCGAAACGGGGTTTAGGAAATTCAGTTATGCTGAATTGAAACAAGCCACCAAAGGTTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGTACTGTGTATAAGGGCGTGCTGTCTGATAATCGAGTTGTGGCGATAAAGCGACTACATGATGTTGCAAACCAAGGAGAAAGTGAGTTCCTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTTAGGGTTTTGTGCGGAGGGTAAGTATAGGCTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAGAACCTTTCATCGAATTCAAATGTACTTGACTGGACTACGAGGTATAACATTGCTGTGGGAACTGCAAGGGGTCTTGCCTACTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAAAATATACTTCTTGACTCTGACTACCAACCTAAGGTAGCGGATTTTGGCTTGTCTAAGCTACTTAACCGGAACAATATGGACAATTCAACCTTCTCGAGGATAAGAGGAACAAGAGGTTACATGGCACCGGAGTGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAGCAGGTATCCAAATAACCCAATTAGAAGCAGAATCACATCATCATGAGAGGTTGGTGACATGGGTGAGGCAGAAAAGGAGGAAAGGATCAGAAGTGGGATCATCTTGGGTTGATCAAATTGTTGACCCTGCTTTGGGATCAAACTATAATAGGAATGAAATAGAGATTTTAGTAACAGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCCAGCATGAGTCATGTTGCCGAGAGGCTCCAAAGTCACGAACACAATTCTTGA 2427 0.452 MHVLMASSTLNLPLLLSLILFCNFHHSSSFSLSVENPNEHIPSLPKGTFTAGFYAVGENAFCFAIWYTRPPHTIVWMANRDHPVNGKRSTLSLLETGNLVLTDANQFQVWSTNIIPTVSKQLRLHLNDTGNLVLLDDSSNLVLWQSFDFPTDTLLPNQPLRGSTNLVSSRSGTNYSSGFYKLFFDFENVLRLMYQGPRVSSVFWPYAWLQSNNFGNGNSNGRSTFNDSRVVVLDDFGAMVSSDNLTFKTTDYGAVLQRRLTLDHDGNVRVYSMKDGEIKWSVSLLFRPQPCFIHGICGPNSYCSNHPRSGRKCSCLPGHKWVDSQDWTKGCIQNFEPWCNNNTEQESRFVHLPEFDFYGYDYGFYQNHTYKECVNQCLRLCECKGFQYSFGEKDGLGSQCYLKTQLLNGHHSQGFSGVFILRLPLSHDYENPQLSGLVCGGNSGGVKVLERPYVEEKENGSVNFMLWFASGLGGIEVLCFFLVWCFLFKNNADKQAYVLAAETGFRKFSYAELKQATKGFSEEIGRGAGGTVYKGVLSDNRVVAIKRLHDVANQGESEFLAEVSIIGRLNHMNLIGMLGFCAEGKYRLLVYEYMENGSLAQNLSSNSNVLDWTTRYNIAVGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRNNMDNSTFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTAGIQITQLEAESHHHERLVTWVRQKRRKGSEVGSSWVDQIVDPALGSNYNRNEIEILVTVALECVEEEKDVRPSMSHVAERLQSHEHNS 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00830 808 FunFam S-receptor-like serine/threonine-protein kinase 488 593 - -
Spst4g00830 808 SUPERFAMILY Protein kinase-like (PK-like) 500 801 IPR011009 -
Spst4g00830 808 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Spst4g00830 808 Gene3D - 35 149 IPR036426 -
Spst4g00830 808 FunFam Serine/threonine-protein kinase 594 808 - -
Spst4g00830 808 Gene3D Transferase(Phosphotransferase) domain 1 594 808 - -
Spst4g00830 808 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Spst4g00830 808 CDD STKc_IRAK 524 802 - -
Spst4g00830 808 ProSiteProfiles PAN/Apple domain profile. 339 424 IPR003609 -
Spst4g00830 808 Pfam S-locus glycoprotein domain 242 320 IPR000858 GO:0048544
Spst4g00830 808 Gene3D Hepatocyte Growth Factor 350 420 - -
Spst4g00830 808 CDD B_lectin 36 150 IPR001480 -
Spst4g00830 808 SMART ntp_6 344 423 IPR003609 -
Spst4g00830 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 165 IPR036426 -
Spst4g00830 808 SMART serkin_6 518 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00830 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Spst4g00830 808 PANTHER OS07G0415500 PROTEIN 14 803 - -
Spst4g00830 808 SMART blect_4 29 150 IPR001480 -
Spst4g00830 808 ProSiteProfiles Protein kinase domain profile. 518 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00830 808 Gene3D Phosphorylase Kinase; domain 1 485 593 - -
Spst4g00830 808 Pfam Protein kinase domain 521 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00830 808 Pfam PAN-like domain 345 406 IPR003609 -
Spst4g00830 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Spst4g00830 808 Pfam D-mannose binding lectin 73 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00830 Spst-Chr4 35945631 35948756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00830 508 805 Trihelix Transcription Factor Family AT5G38560 43.854 3.54e-71 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst4g00830 Pkinase 3.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00830 - - gmx:100808408 1324.69