Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00829 ATGGCCCCTTCAACACTCATTTTGAATCTTCTCCTTGCTCTAATATTTTTCCAAAATTTCGATGATTCATCATCGTTGTCTCTTTCCGTAGAGAATCTGAAAGAAGACATAATAGTGTCATCACCCAAACAAACATTCACCGCAGGCTTTTACGCCGTAGGAGAAAACGCATACTGTTTCGCAATATGGTATACCCAACCACCCCACACCGTTATTTGGATGGCCAACCGGGACCAACCGGTAAACGGAAAACGCTCCACGCTTTCCCTTCTCACAACCGGTAACCTCGTACTCACCGACGCTTCTCAGTTCCAAGTGTGGTCCACAAACACCGTCGCCACATCCAAACGAGTTCAGTTAAGTTTGCACGACACTGGGAACCTCATACTGCTCGAAAGCCAAGACCGTTCCTCCAACGTTGTTTTGTGGCAGAGCTTCGATTTCCCAACCGACACGCTTCTTCCTGGTCAAATTCTGAGCAAGAGCACCAACCTCGTTTCCTCGAGAAGCGGGAGCAACTACTCCTCCGGTTTCTACAAACTCTTCTTCGACTTCGAGAATGTTCTTCGCATCATGTACCAGGGTCCTCAAGTTTCCAGCGTTTATTGGCCAGACCCTTGGCTTCAGAACAACAACTTCGGAAACGGTGGCGCGGGAAATGGTCGATCCACTTATAACGATAGCAGGGTGGCTGTGCTTGATGATTTCGGCTACTTTAATTCTTCCGATAACTTCAGTTTCAGAAGCATTGATTACGGGACGGTGCTTCAACGGAGATTGACCCTCGACCACGACGGTGGTGTGAGGGTGTACAGCCAGAACGATGGGGAAGAGAAGTGGACAATGTCTGGGGAATTTCGCTCGCATCCATGCTACGTTCATGGGATTTGTGGAGCCAACAGTTATTGCAACTACGAGCCTTCCAGTGGTAGAAGGTGTTCGTGCCTTCCAGGTCATTCCTGGGTTGATAGTGAAGACTGGTCTCAAGGTTGCAAACCGAATTTCCAACATTCGTGCAGCGGCAGCAACGCCGAGTATGAGTCTCGCTTCCTGCGCATACCTGATGTTGATTTCTATGGATACGACTATGGCTACTTTGGAAATTACACCTATCAACAGTGTGAGAATCTCTGCTCGCAGATGTGCGTATGCAAAGGGTTTCAATACAGCTTTTCAGAGGCAAATGCTTTCTTTCAGTGCTACCCAAAGACGCATTTGCTTAATGGGAACAGTCAACCAGGGTTCATGGGCTCATTCTTCCTGAAACTTCCATTATCGTCCCATGATGAGTATAAGAACACCATCCAAAATAATAGCTTGGTTTGTGGGGGAGATAGTAAAGGAGTTGAGGTGCTTGAGAGATCGTATGTCCAAGAGGGAAAAAATGGATCAGTGAAGTTCATGCTATGGTTCGCAACTGTCTTGGGAGGAGTTGAACTATTGTGCATCTTTCTGGTGTGGTGTTTTTTGTTTAGGAATAATAGGACGTTACCCTCAGGTGCTGAGGGACAAGGGTATGTTCTTGCAGCAGCTGCGGGTTTCAGGAAATTCAGTTACTCTGAACTGAAACAAGCCTCTAAAGGTTTTAGTGAAGAGATTGGAAGGGGTGGTGGAGGTACCGTTTATAAAGGTGTCCTGTCTGATGATCGAGTTGTGGCGATAAAAAGACTACATGAAGTAGCAAACCAGGGAGAAAGTGAGTTCCTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGCATGTTGGGGTATTGCGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCCTTAGCTCAGAATATATCATCAAGTTCAAATATACTTGACTGGAGTAAAAGGTGTAACATTGCCCTGGGAACAGCAAGGGGTCTGGCATACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAGAATATACTTCTTGACTCTGATTATAAACCGAAGGTAGCGGATTTTGGCTTGTCGAAGCTACTTAACCGGAACAATCTCAACAATTCAAGCTTCTCAAGGGTAAGAGGGACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTACCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCATTGTTGTCTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAAATCACAGAATTAGAAGCAGAGTCACCTCATCCTGAGAGGTTGGTGACATGGGTGAGGGAGAAGAGGAAGAAAGGATCAGAAGTGGGACCATCTTGGGTGGATCAAATTGTTGACCCAGCTTTGAGATCAAACTATGACATGAAAGAAATGGAAATATTGGCAACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAAATGCTAGGCCCAGCATGAGTCAAGTAACAGAGAAGCTGCAGAGTCATGTGCACATGATTGTTGATGGTTTGAACAAAGAATAG 2475 0.4582 MAPSTLILNLLLALIFFQNFDDSSSLSLSVENLKEDIIVSSPKQTFTAGFYAVGENAYCFAIWYTQPPHTVIWMANRDQPVNGKRSTLSLLTTGNLVLTDASQFQVWSTNTVATSKRVQLSLHDTGNLILLESQDRSSNVVLWQSFDFPTDTLLPGQILSKSTNLVSSRSGSNYSSGFYKLFFDFENVLRIMYQGPQVSSVYWPDPWLQNNNFGNGGAGNGRSTYNDSRVAVLDDFGYFNSSDNFSFRSIDYGTVLQRRLTLDHDGGVRVYSQNDGEEKWTMSGEFRSHPCYVHGICGANSYCNYEPSSGRRCSCLPGHSWVDSEDWSQGCKPNFQHSCSGSNAEYESRFLRIPDVDFYGYDYGYFGNYTYQQCENLCSQMCVCKGFQYSFSEANAFFQCYPKTHLLNGNSQPGFMGSFFLKLPLSSHDEYKNTIQNNSLVCGGDSKGVEVLERSYVQEGKNGSVKFMLWFATVLGGVELLCIFLVWCFLFRNNRTLPSGAEGQGYVLAAAAGFRKFSYSELKQASKGFSEEIGRGGGGTVYKGVLSDDRVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMENGSLAQNISSSSNILDWSKRCNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVADFGLSKLLNRNNLNNSSFSRVRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVQITELEAESPHPERLVTWVREKRKKGSEVGPSWVDQIVDPALRSNYDMKEMEILATVALECVEEEKNARPSMSQVTEKLQSHVHMIVDGLNKE 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00829 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Spst4g00829 824 FunFam S-receptor-like serine/threonine-protein kinase 498 602 - -
Spst4g00829 824 Gene3D Transferase(Phosphotransferase) domain 1 603 819 - -
Spst4g00829 824 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Spst4g00829 824 PANTHER OS07G0415500 PROTEIN 10 812 - -
Spst4g00829 824 Gene3D - 27 147 IPR036426 -
Spst4g00829 824 Pfam S-locus glycoprotein domain 244 319 IPR000858 GO:0048544
Spst4g00829 824 Gene3D Hepatocyte Growth Factor 352 418 - -
Spst4g00829 824 CDD B_lectin 33 149 IPR001480 -
Spst4g00829 824 CDD STKc_IRAK 533 811 - -
Spst4g00829 824 ProSiteProfiles Protein kinase domain profile. 527 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00829 824 PIRSF SRK 1 819 IPR024171 GO:0004674
Spst4g00829 824 SMART blect_4 30 149 IPR001480 -
Spst4g00829 824 FunFam Serine/threonine-protein kinase 603 817 - -
Spst4g00829 824 Pfam Protein kinase domain 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00829 824 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Spst4g00829 824 SUPERFAMILY Protein kinase-like (PK-like) 514 808 IPR011009 -
Spst4g00829 824 CDD PAN_AP_plant 338 424 - -
Spst4g00829 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 204 IPR036426 -
Spst4g00829 824 Pfam D-mannose binding lectin 70 162 IPR001480 -
Spst4g00829 824 SMART serkin_6 527 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00829 824 Gene3D Phosphorylase Kinase; domain 1 501 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00829 Spst-Chr4 35901356 35904262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00829 517 812 Trihelix Transcription Factor Family AT5G38560 45.151 1.04e-71 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst4g00829 Pkinase 5.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00829 - - gmx:100808940 1370.91