Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00814 ATGTTGGACTACGAATGGGGAAACCCGTCTTCCATAATGCTAACCGGAAACGAGGAGACCGCCACCGGAGCTTCCGACCAAGCCCACCGTCAAATCTTCGACCACTACGCCTCCCACTCGCTCCTCCCCGACCACTTTCTTCACGCGCCAACACACTCCGCCGCTACCACCGCAGCGGCCGCCACCGTCGACTTCACCCACCACCACCACCACCACTTCAACCCGCAACCACACCACATGAACCACCACCACCACCCCTTCTTCGACCCACGCGCCTTCCACGGCGCGTCGTCCACCTCCTACCCCCCACCCCCTTCCATGCTCTCCCTTGACCCGCTGCCCCACGTCAACGCGGCCAACTGCGGGCCTGGGCTCGGACCAGGCCCGGGCGGACTCCTCCTTGTCCCCAAGTCTGAGGACGTCGGCCGGCCCATGGATGTCGGCTCACGAATTGGCCTCAACCTCGGAGGACGAACTTACTTCTCCTCCTCCGAAGATGACTTCGTGAGCCGACTCTACCGTCGGTCTCGCCCAGCCGAACCGGGTTCGACGGCTTCGTCCAACTCGCCGCGGTGTCAGGCGGAGGGATGCAATGCTGATCTGTCTCAGGCGAAGCACTACCACCGCCGCCACAAGGTGTGCGAGTTCCACTCCAAAGCCGCCACCGTCATCGCAGCCGGGTTGACTCAGCGGTTCTGCCAGCAATGCAGCAGGTTCCATCTTCTTTCTGAGTTCGATAACGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCACAATCGCCGCAGAAGAAAAACTCAGCAACCAACTCAAGAAATTCAGAAATCTCAACCCTCTTTGGATAACGTTGCAAGATCTCCACCTGACTCCGGAGCTCAGTTGTCGTCGGTGACGGTAGCAGTGTCGCCGCCGGACTATTTCCGGCAGAGGCCGTATCAAAGCACAAACCCTTCTACAAATTCAAGCTCACTGTTTTTCTCTAGCGGGTAG 990 0.5939 MLDYEWGNPSSIMLTGNEETATGASDQAHRQIFDHYASHSLLPDHFLHAPTHSAATTAAAATVDFTHHHHHHFNPQPHHMNHHHHPFFDPRAFHGASSTSYPPPPSMLSLDPLPHVNAANCGPGLGPGPGGLLLVPKSEDVGRPMDVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKSQPSLDNVARSPPDSGAQLSSVTVAVSPPDYFRQRPYQSTNPSTNSSSLFFSSG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00814 329 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 174 320 IPR044817 GO:0003677
Spst4g00814 329 FunFam Squamosa promoter-binding-like protein 14 183 253 - -
Spst4g00814 329 ProSiteProfiles Zinc finger SBP-type profile. 189 266 IPR004333 GO:0003677
Spst4g00814 329 MobiDBLite consensus disorder prediction 255 329 - -
Spst4g00814 329 Gene3D - 182 253 IPR036893 GO:0003677|GO:0005634
Spst4g00814 329 Pfam SBP domain 192 265 IPR004333 GO:0003677
Spst4g00814 329 MobiDBLite consensus disorder prediction 270 329 - -
Spst4g00814 329 SUPERFAMILY SBT domain 190 270 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00814 Spst-Chr4 35361967 35363986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00814 1 239 SBP-box Gene Family AT1G02065 44.094 9.91e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Spst4g00814 SBP 4.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00814 - - gmx:100778566 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00814 4 35361967 35363986 Spst4g00814 4 35361967 35363986 ECH