Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst4g00806 | ATGAGAAAACGTATCAATATGGAAAGTGATGCTGACTTTTTCAATTCCTTTGCCACATCCTCCTCCTCCTCCTCCTCCACTTCCACTTCCACTTCCTCCACCACCACAACCCCTTCAATCGTCATTGAAACCAACATTTCTAGCACCACATCATCATCATCGTCGTCATCATCCTCAACCTCACACTCACACTCAGATTCATGCACCAAAGCACACTCCAAAACCCCTCAAAATGACTCAACCACTTCTCAAACCTCGTTGGAAAATGAGAAGGACTCAAAAGGGTGCAAGAAGAGGCAGAGGGAGAATCCTAGCAACCAGAACTACCCTACTTATAGGGGTGTGAGGATGAGGAATTGGGGCAAATGGGTGTCTGAAATCCGTGAGCCAAGGAAGAAGTCAAGAATTTGGCTTGGAACATACCCTACAGCAGAAATGGCTGCTAGAGCACATGATGTGGCTGCCTTAGCCATCAAGGGCCACTCAGCATACCTCAATTTCCCTGAATTGGCTCAAGAACTTCCAAGGCCAGCTACCACATCACCTAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAAACACACCCTTTGACTTGGCTAAGTATTGCCAAAGTATTGAAGAAGATGAAGAAGAAGAAGAACCAAGCCAAGCAGAACATGCCTCATCTTCAACTCTCTCAATGGACAACAACACACAAGACTCTTCAAGCTCTCACTCTACCAATGAAGATGAAACTTTCTTTGACCTACCAGATCTTTTTCCTGATGGACTCTGCTCCTATTCTTCTTCCTGGCATTTGTGTGCAGTGGATAGTGGCTTTAGGCTTGAGGAGTCATTTTTTTGGGAGAATTATTAG | 858 | 0.4534 | MRKRINMESDADFFNSFATSSSSSSSTSTSTSSTTTTPSIVIETNISSTTSSSSSSSSSTSHSHSDSCTKAHSKTPQNDSTTSQTSLENEKDSKGCKKRQRENPSNQNYPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPATTSPKDIQAAAAKAANTPFDLAKYCQSIEEDEEEEEPSQAEHASSSTLSMDNNTQDSSSSHSTNEDETFFDLPDLFPDGLCSYSSSWHLCAVDSGFRLEESFFWENY | 285 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst4g00806 | 285 | SUPERFAMILY | DNA-binding domain | 111 | 169 | IPR016177 | GO:0003677 | |
Spst4g00806 | 285 | MobiDBLite | consensus disorder prediction | 1 | 113 | - | - | |
Spst4g00806 | 285 | MobiDBLite | consensus disorder prediction | 12 | 89 | - | - | |
Spst4g00806 | 285 | PRINTS | Ethylene responsive element binding protein signature | 112 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | PRINTS | Ethylene responsive element binding protein signature | 134 | 150 | IPR001471 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | SMART | rav1_2 | 111 | 174 | IPR001471 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | MobiDBLite | consensus disorder prediction | 219 | 244 | - | - | |
Spst4g00806 | 285 | Gene3D | AP2/ERF domain | 111 | 169 | IPR036955 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 90 | 254 | - | - | |
Spst4g00806 | 285 | FunFam | Ethylene-responsive transcription factor 2 | 111 | 169 | - | - | |
Spst4g00806 | 285 | CDD | AP2 | 112 | 170 | IPR001471 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | ProSiteProfiles | AP2/ERF domain profile. | 111 | 168 | IPR001471 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | Pfam | AP2 domain | 110 | 161 | IPR001471 | GO:0003700|GO:0006355 | |
Spst4g00806 | 285 | MobiDBLite | consensus disorder prediction | 206 | 244 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst4g00806 | Spst-Chr4 | 35263947 | 35264804 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst4g00806 | 98 | 281 | AP2-EREBP Transcription Factor Family | AT2G44940 | 56.039 | 1.94e-67 | 210 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Spst4g00806 | AP2 | 3.5e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst4g00806 | - | - | gmx:100801129 | 372.859 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst4g00806 | 4 | 35263947 | 35264804 | Spst4g00806 | 4 | 35263947 | 35264804 | ECH |