Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00806 ATGAGAAAACGTATCAATATGGAAAGTGATGCTGACTTTTTCAATTCCTTTGCCACATCCTCCTCCTCCTCCTCCTCCACTTCCACTTCCACTTCCTCCACCACCACAACCCCTTCAATCGTCATTGAAACCAACATTTCTAGCACCACATCATCATCATCGTCGTCATCATCCTCAACCTCACACTCACACTCAGATTCATGCACCAAAGCACACTCCAAAACCCCTCAAAATGACTCAACCACTTCTCAAACCTCGTTGGAAAATGAGAAGGACTCAAAAGGGTGCAAGAAGAGGCAGAGGGAGAATCCTAGCAACCAGAACTACCCTACTTATAGGGGTGTGAGGATGAGGAATTGGGGCAAATGGGTGTCTGAAATCCGTGAGCCAAGGAAGAAGTCAAGAATTTGGCTTGGAACATACCCTACAGCAGAAATGGCTGCTAGAGCACATGATGTGGCTGCCTTAGCCATCAAGGGCCACTCAGCATACCTCAATTTCCCTGAATTGGCTCAAGAACTTCCAAGGCCAGCTACCACATCACCTAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAAACACACCCTTTGACTTGGCTAAGTATTGCCAAAGTATTGAAGAAGATGAAGAAGAAGAAGAACCAAGCCAAGCAGAACATGCCTCATCTTCAACTCTCTCAATGGACAACAACACACAAGACTCTTCAAGCTCTCACTCTACCAATGAAGATGAAACTTTCTTTGACCTACCAGATCTTTTTCCTGATGGACTCTGCTCCTATTCTTCTTCCTGGCATTTGTGTGCAGTGGATAGTGGCTTTAGGCTTGAGGAGTCATTTTTTTGGGAGAATTATTAG 858 0.4534 MRKRINMESDADFFNSFATSSSSSSSTSTSTSSTTTTPSIVIETNISSTTSSSSSSSSSTSHSHSDSCTKAHSKTPQNDSTTSQTSLENEKDSKGCKKRQRENPSNQNYPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPATTSPKDIQAAAAKAANTPFDLAKYCQSIEEDEEEEEPSQAEHASSSTLSMDNNTQDSSSSHSTNEDETFFDLPDLFPDGLCSYSSSWHLCAVDSGFRLEESFFWENY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00806 285 SUPERFAMILY DNA-binding domain 111 169 IPR016177 GO:0003677
Spst4g00806 285 MobiDBLite consensus disorder prediction 1 113 - -
Spst4g00806 285 MobiDBLite consensus disorder prediction 12 89 - -
Spst4g00806 285 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Spst4g00806 285 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Spst4g00806 285 SMART rav1_2 111 174 IPR001471 GO:0003700|GO:0006355
Spst4g00806 285 MobiDBLite consensus disorder prediction 219 244 - -
Spst4g00806 285 Gene3D AP2/ERF domain 111 169 IPR036955 GO:0003700|GO:0006355
Spst4g00806 285 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 90 254 - -
Spst4g00806 285 FunFam Ethylene-responsive transcription factor 2 111 169 - -
Spst4g00806 285 CDD AP2 112 170 IPR001471 GO:0003700|GO:0006355
Spst4g00806 285 ProSiteProfiles AP2/ERF domain profile. 111 168 IPR001471 GO:0003700|GO:0006355
Spst4g00806 285 Pfam AP2 domain 110 161 IPR001471 GO:0003700|GO:0006355
Spst4g00806 285 MobiDBLite consensus disorder prediction 206 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00806 Spst-Chr4 35263947 35264804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00806 98 281 AP2-EREBP Transcription Factor Family AT2G44940 56.039 1.94e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst4g00806 AP2 3.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00806 - - gmx:100801129 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00806 4 35263947 35264804 Spst4g00806 4 35263947 35264804 ECH