Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00805 ATGACCAATTGCATAATAACCAAGGCGTGGTGGACTCAACGGTCCAAGCAGCCGAATCCTCACCCAATCGAAATCGCTGCCACAGCAGCGTGCTTGAATCCTAAGCGAAGGTTTCGGTTCTCCCTTGTAGAAAAAGAAGAGTCACCACTTCCACGCCGGCTTGGTGCTGTAGTCATGTTTGGACGTGGTGGACCAAGGAGGAGTGATAACTCCAAATATTATGATATTCTTGGAGTTTCAAAGAGTGCAAATGAAGATGAAATCAAGAAGGCCTATAGAAAGGCGGCAATGAAGAACCATCCAGATAAGGGTGGAGATCCTGAGAAGTTTAAGGAGTTAGGTCAAGCATATGAAGTTTTAAGTGATCCTGAAAAGAAAGAAATGTATGACCAATATGGTGAAGATGCCCTTAAAGAAGGGATGGGAGGAGGAGGAGGAGGCTCGTTTCATAATCCTTTTGATATATTTGAGTCATTTTTTGGAGGATCAAGCTTTGGTGGTGGTGGTGGTAGTTCTCGAGGTAGAAGACAAAAGCACGGTGAAGATGTGGTGCATTCTCTAAAGGTTTCCTTGGAGGATGTCTATAATGGCACAACTAAGAAATTATCTCTTTCCAGGAACGTATTATGCCCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAACAGCTGGTAGGTGTTTTGGTTGTCAAGGCACTGGTATGAAGGTCACAAGAAGGCAGATAGGACTAGGCATGATTCAACAGATGCAACATGTCTGCTCTGACTGCAGAGGATCTGGTGAGGTTATTAATGAGAGAGATAAATGTCCTCAGTGCAAAGGAAACAAGGTTACTCAGGAAAAGAAGGTGCTGGAGGTGCATGTTGAGAAGGGGATGCAGCAGGGTCAGAAGATTGTCTTTGAAGGACAAGCTGATGAAGCTCCTGATACAATCACTGGAGACATTGTTTTTGTATTGCAAGTGAAGGAGCACCCAAAGTTCAGGAGGGAGCATGATGATCTCTTCATTGATCACAATCTCAGCTTACACGAGGCACTCTGTGGCTTCCAGTTTGCTGTCACACATCTTGATGGTAGGCAATTACTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGTCAATATAAAGCAATAAATGATGAGGGTATGCCACAACACAATAGGCCATTCATGAAGGGTAGTCTCTACATCCAGTTCAATGTTGATTTCCCAGACTCAGGGTTTCTTTCTCCTGATCAATGTCAATTACTGGAAAAGGTCTTACCTCAGAAGAGCAGCAAGCAAATGTCAGAAATGGAGCTGGAAGAGTGTGAGGAGGCCACTTTGCATGATGTCAACTTCAAGGAGGAGATGAGACGAAAGCAGCAGCAGCATCAACATCAACGCGAGGCATACGATGAAGACGATGATGAGCCATCTGGTCACCGAGTGCAATGTGCTCAACAATAG 1452 0.4449 MTNCIITKAWWTQRSKQPNPHPIEIAATAACLNPKRRFRFSLVEKEESPLPRRLGAVVMFGRGGPRRSDNSKYYDILGVSKSANEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKKEMYDQYGEDALKEGMGGGGGGSFHNPFDIFESFFGGSSFGGGGGSSRGRRQKHGEDVVHSLKVSLEDVYNGTTKKLSLSRNVLCPKCKGKGSKSGTAGRCFGCQGTGMKVTRRQIGLGMIQQMQHVCSDCRGSGEVINERDKCPQCKGNKVTQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKEHPKFRREHDDLFIDHNLSLHEALCGFQFAVTHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPQHNRPFMKGSLYIQFNVDFPDSGFLSPDQCQLLEKVLPQKSSKQMSEMELEECEEATLHDVNFKEEMRRKQQQHQHQREAYDEDDDEPSGHRVQCAQQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00805 483 Pfam DnaJ domain 72 130 IPR001623 -
Spst4g00805 483 CDD DnaJ_zf 210 276 IPR001305 GO:0031072|GO:0051082
Spst4g00805 483 SUPERFAMILY HSP40/DnaJ peptide-binding domain 327 414 IPR008971 GO:0006457|GO:0051082
Spst4g00805 483 PRINTS DnaJ domain signature 105 125 IPR001623 -
Spst4g00805 483 PRINTS DnaJ domain signature 74 92 IPR001623 -
Spst4g00805 483 PRINTS DnaJ domain signature 125 144 IPR001623 -
Spst4g00805 483 Hamap Chaperone protein DnaJ [dnaJ]. 69 455 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Spst4g00805 483 FunFam dnaJ protein homolog 69 171 - -
Spst4g00805 483 Gene3D - 324 406 - -
Spst4g00805 483 CDD DnaJ 73 122 IPR001623 -
Spst4g00805 483 ProSiteProfiles dnaJ domain profile. 72 133 IPR001623 -
Spst4g00805 483 Gene3D - 172 323 - -
Spst4g00805 483 MobiDBLite consensus disorder prediction 450 476 - -
Spst4g00805 483 FunFam DnaJ subfamily A member 2 210 276 - -
Spst4g00805 483 SMART dnaj_3 71 125 IPR001623 -
Spst4g00805 483 Gene3D - 210 276 - -
Spst4g00805 483 CDD DnaJ_C 181 407 - -
Spst4g00805 483 MobiDBLite consensus disorder prediction 450 483 - -
Spst4g00805 483 SUPERFAMILY HSP40/DnaJ peptide-binding domain 181 325 IPR008971 GO:0006457|GO:0051082
Spst4g00805 483 Pfam DnaJ C terminal domain 184 405 IPR002939 -
Spst4g00805 483 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 71 460 IPR044713 GO:0006457|GO:0030544
Spst4g00805 483 Coils Coil 449 469 - -
Spst4g00805 483 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Spst4g00805 483 SUPERFAMILY Chaperone J-domain 68 169 IPR036869 -
Spst4g00805 483 FunFam DnaJ subfamily A member 2 324 406 - -
Spst4g00805 483 ProSiteProfiles Zinc finger CR-type profile. 197 281 IPR001305 GO:0031072|GO:0051082
Spst4g00805 483 Gene3D DnaJ domain 69 171 IPR036869 -
Spst4g00805 483 Pfam DnaJ central domain 210 276 IPR001305 GO:0031072|GO:0051082
Spst4g00805 483 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 279 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00805 Spst-Chr4 35245100 35248878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00805 67 132 C2H2 Transcription Factor Family AT1G74250 42.667 3.01e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00805 K09503 - gmx:100812236 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00805 4 35245100 35248878 Spst4g00805 4 35245100 35248878 ECH