Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00786 ATGTTGTCGTTTTTTCGTTTGAACTTCCCTTGTCCTGTACAAGGCACTATATTTTGTCAAAGGAAACAATTAACTCATGGATGCACAAACCAAAACTCAAAGGATTACTTAGTGCAGGATAGTTGCATGTTGCATTCTGAGAAATCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTAGTGTTTTTCCAACTTTGCCTTCTTATGGGAAGACAAAGAGTACAAATCCTTACGATGAAAAACGGTTGCTACAACAAAATCGGCGGATACAGAAAGAAAACAATGCGCCTGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTCAAGTTAAAGTAGTATCTTCAGATAACTATGTAAAGAGTGACTCGGGGCTCATATACCGGGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATAGACAGCTCTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACTAAGGCATTAGTTCCAGGATTTGAGGAAGGGATTAAAGACATGAGACCTGGTGGGAAGAGAAGAATCATCATCCCCCCGGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCGCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCGTACAAAACTGTGAAAGAAGGACCGTAGCCTTTTACTCGGATGTCGTTTGCAATTGA 741 0.413 MLSFFRLNFPCPVQGTIFCQRKQLTHGCTNQNSKDYLVQDSCMLHSEKSLRRTLFLSVLVSTSVFPTLPSYGKTKSTNPYDEKRLLQQNRRIQKENNAPEDFPNFIREGFQVKVVSSDNYVKSDSGLIYRDFVVGQGDCPKDGQQVTFHYVGYNESGRRIDSSYLQGTPAKIRMGTKALVPGFEEGIKDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQNCERRTVAFYSDVVCN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00786 246 SUPERFAMILY FKBP-like 74 230 - -
Spst4g00786 246 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 140 226 IPR001179 GO:0003755
Spst4g00786 246 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 143 230 IPR001179 GO:0003755
Spst4g00786 246 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 8 246 IPR044239 -
Spst4g00786 246 Gene3D - 88 238 IPR046357 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00786 138 232 Calmodulin-binding Proteins AT5G48570 33.333 1.80e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00786 - - gmx:100305486 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00786 4 34857918 34866583 Spst4g00786 4 34857918 34866583 ECH