Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00762 ATGGGACCCGTGTTTGGGGAGGAACACTGTAGAGTCTCTGATGGGTCCCTGTTAAGTTCCGTTTGGTTTTGTTTTTATGAATTATTGTTCACTGCAAAATCTGGTGCGCTGCCAGTTCACGGAGGCCACCATGCACGCGCATGCGCTACTTCCTGTTCAATGTCTCCCGCGCCATCATCTGTTGGATGGTTACTTGATGGAGCCATGAGATATATGGATATTCCAGTTCATCGCAACAAACAAGAAAAAGAGACACACGCGCTTGCAGGAGGAGTGGGAATGCACGCGCCATTTTTGAGAAATCCAAAAGCCGATCAAGGAAAACGGCTTGACGTTGATGACAGAGAGAAAGAGAGAAAAGAAATGTACCTTAAAGAACCAACACTATTCCTCTTTTTGTCTCACGAAGATTGGCTTGCAACTCTTGCGTTTATGTGGAGGGTTGCTGAGCCGAAGTTACTTCCGCGGAACTTGCCTATCCTTGTTGAGGTATCGAAAGCACACACATCTTCATCAAGAGAGTCAGGTCAGAGACTAAATCGTCAGGAGGTTTCTGGTGCTGGTGGAATTTCACTTAGAGAAGTGAATCAATTGTCAAAAACAAGGGATGTGCATGGCCCTATTTCACATCTGGCCTCAATCAGAGAAGTGGCCCAGTTAACTAATGCACGAATATATTTGGTACAAGAAGATATGGGATTTGATGCTCGATCCTCTGAGGAATCCCTCACCTTTGAGCCCACTATGACATGGAAAGGAAAGGGCTCTTCACCGGAAGCTGAAGAGTTTGTGCCTGATGTTGAGACATTGAAGGGAAGCAGCTATTCGTTTGAGGATGGTGGTCCAAGTTTATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTAATGAGAACGGTTTATGTACCAATAGGTCAAAACAAAGCTGAGGCTAGTTGCTTAATTAAGAACTTGCCCACAAAAGGCCCTTTCTTGGAAGATCTCTCCATTCGTGTTCCTGCAAAGAAACCAAACCCAGCTGTTCTTTCCCCTGAACAAAGTCTGGTTGAAGAACTAAATGACATAGGGAACTTGGCATTTTTGGGTCCTCGAGCATCACAGCATACCGAGAATTCTGTACTCCCACCAGATGCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTCAGTCCACTTAGTAGTATTGATAGTACTGGTGTTGTTACCGCAATGAGCATTGTTAATAGTTGTGCTAGTACATATCGGAGTGATGCAATGACTAGTGATGGCATGCTTAGTTTAGACAGGAACTTTGATAGTACTAAAGGGAGTGTAAGGGGGGATTCACTGGAGAGTGCTAAAACTAGTGCCAGCCGGGCAAGTGATAGCAGTGGCCTCAGCGATGACAGCAACTGGAGCAACATTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATTCTTGCCATCAGATTACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGTCTAGGATGTGGCGACATTGGAAGTGTGTATCTTTCAGAACTGAGTGGAACCCGGTGTTATTTTGCTATGAAAGTTATGGATAAGGCTTCCCTTGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCAACTTTGTATACACATTTTGAGACTGATAGATTCTCGTGTTTGGTAATGGAATATTGTCCAGGAGGTGATCTGCACACTTTAAGGCAGCGACAACCTGGGAAACATTTCTCAGAGTATGCTGCACGGTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTGGTGTATAGAGACCTTAAACCCGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTTAGATGTGCTGTGTCACCTACTCTAATTAGATCATCCTATGACAGTGACCCTTCCAAACGTGCTGGTGGTGCATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAGTGTGCATCCAACCTGCATGTTTTATTCCTCGGTTATTTTCTCAGAAAAACAAGAAGCTAAGGAAACCAAGAGTTGATCCTGGGCTGCCATCCAGCACACTTCCAGAGCTAGTTGCGGAGCCTACTGCAGCTCGGTCTATGTCCTTTGTTGGCACACATGAGTACCTTGCCCCAGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACCCCTTTCAAAGGTTCAGGAAACCGCGCTACACTTTTCAATGTAGTAGGCCAACAGCTCAGGTTTCCGGAATCACCTGCAACCAGTTACGCCAGCAGGGATCTGATCCGGGGGTTGCTAGTGAAGGAGCCACAGCATCGGCTAGGGTTTAAAAGGGGTGCAACTGAGATCAAGCAGCACCCCTTTTTTGAAGGGGTGAACTGGGCATTGATTAGGTGCAGCACGCCCCCAGAAGTGCCGAGACCAGTGGAAAATGAACAACTACCAGGGAAGGTTGGACCAGTTGATAATACTGTTGGGGTTGGCAGCACTAGTAAGAGGACAGTAGGTACTACTACTGACAACATGAAGTCGGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2727 0.4558 MGPVFGEEHCRVSDGSLLSSVWFCFYELLFTAKSGALPVHGGHHARACATSCSMSPAPSSVGWLLDGAMRYMDIPVHRNKQEKETHALAGGVGMHAPFLRNPKADQGKRLDVDDREKERKEMYLKEPTLFLFLSHEDWLATLAFMWRVAEPKLLPRNLPILVEVSKAHTSSSRESGQRLNRQEVSGAGGISLREVNQLSKTRDVHGPISHLASIREVAQLTNARIYLVQEDMGFDARSSEESLTFEPTMTWKGKGSSPEAEEFVPDVETLKGSSYSFEDGGPSLFAGASHPPEPVDTDLMRTVYVPIGQNKAEASCLIKNLPTKGPFLEDLSIRVPAKKPNPAVLSPEQSLVEELNDIGNLAFLGPRASQHTENSVLPPDAEEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIVNSCASTYRSDAMTSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRSSYDSDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFSQKNKKLRKPRVDPGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGFKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEQLPGKVGPVDNTVGVGSTSKRTVGTTTDNMKSGGKYLDFEFF 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00762 908 MobiDBLite consensus disorder prediction 864 892 - -
Spst4g00762 908 Pfam Protein kinase domain 511 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00762 908 Pfam Protein kinase domain 740 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00762 908 FunFam serine/threonine-protein kinase D6PK-like 594 661 - -
Spst4g00762 908 FunFam Serine/threonine-protein kinase D6PK-like 508 593 - -
Spst4g00762 908 MobiDBLite consensus disorder prediction 878 892 - -
Spst4g00762 908 SUPERFAMILY Protein kinase-like (PK-like) 491 866 IPR011009 -
Spst4g00762 908 Gene3D Transferase(Phosphotransferase) domain 1 739 861 - -
Spst4g00762 908 SMART serkin_6 510 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00762 908 PANTHER FLIPPASE KINASE 1-RELATED 285 866 - -
Spst4g00762 908 Gene3D Transferase(Phosphotransferase) domain 1 594 661 - -
Spst4g00762 908 ProSiteProfiles Protein kinase domain profile. 510 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00762 908 Gene3D Phosphorylase Kinase; domain 1 508 593 - -
Spst4g00762 908 CDD STKc_phototropin_like 508 862 - -
Spst4g00762 908 MobiDBLite consensus disorder prediction 438 487 - -
Spst4g00762 908 FunFam serine/threonine-protein kinase D6PK-like 738 861 - -
Spst4g00762 908 MobiDBLite consensus disorder prediction 438 483 - -
Spst4g00762 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00762 Spst-Chr4 34537723 34548043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00762 145 908 AGC Kinase Gene Family AT2G44830 65.987 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst4g00762 Pkinase 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00762 - - gmx:100792314 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00762 4 34537723 34548043 Spst4g00762 4 34537723 34548043 ECH
Spst4g00762 4 34537723 34548043 Spst1g01254 1 14962841 14966393 PCT