Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00729 ATGGATGAAGATCAAGAGATGGAGAGGTTCGGAATGGATAATGATTATGAAGGTGGTCAATGGATTGGTGACGAGTTTTACTACAAGAGTCGTAAAGAAAAACGCACTCAGACCAAGGATGATGTTCTTTTTGGAGTTTTTGCAGATTCTGATGATGATGATGATTATCCAAGTAGAAAACGGAGGAAGGACCGTGATTTTTCAAAGAAGGCAGACCTAACCAAGCCTGTCAATTTTGTGTCTACGGGCACATTTATGCCCAATCAGGAGAATGATAATAAGTCCAAAGATCAGAATGAGAAAGAAGGTTATGTTAGTGAGGATAGGCCGGGGTTAGGTTTAGGTTTTGGTATGGGGTCTGGTAGTACCTCTGGGCCTGGTTTAGGTTTTAATTCTGGTAACGCTGCTAACGGTTCAGAAAGAAATGATGATTCTGATGAGAATGGTCATGATAATTTCTTGCCTACAGCATTTGGGAAGAAGATTAAGGAGGGGGCGATGAGAAGGGAAAGGGAACGAGAGAAGGAGAGGATGGAGAAGAAGAGAGGGAAGCATCAGAGTTTAGCTCAAGATGGGTTTAGTGATGTGGGGAAATTTGAGAAGCATACAAAAGGGATAGGCTTGAAGCTGTTGGAGAAGATGGGTTATAAAGGAGGCGGGCTTGGGAAGAATGAGCAGGGTATTGTGGCTCCTATTGAGGCTAAATTGAGGGCCAAGAATTCTGGCATAGGGTTTAATGAGTCTAAGGAGACTATGCCAGTGCCTGTTTTGCAGCAAGAGAAGAAGAATGTGCAAGAAGTCTCCCAAACTGTGGTTAGCAAAACAAAAGAAAGGCTATGGTCAAAGCAAGCAAGGTTGAAGAAAAAAAAGGAGGAAGAGTATATAACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAGGAGTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAGGTTCGGGTATTAACAAATTTGTCTGATTTGAATGCCGAGGAGAAAGCAAAAGAAAATGATATCCCAATGCCAGAACTTCAGCATAATGTAGCGTTAATAGTTCGGTTGGCCGAGGCTGACATCCAAGAGATCGATAGAGATTTGAGGAGAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGCAGCATTTCAAAAGAAGCAGCTGGATAATATGGAAGAAATAATGCATGTTTTAGACCGTGTTGGAGAAGAAAACACTTTGGGAACATTAACATTGGAGTCCCTTGCTCAATGCTTTAGAGATTTACACAAAAGATGTGCTGATAACTACAAGTTGTGTAACTTGTCATGCATTGCTTGTTCATATGCTATACCCCTTTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCGTCTCATGGGTTGGAGTTAGTTTCAAAGTGGAGGGCATTGCTTCAAGCAGAAGATTCAGTCGATATATGGGATGTATCATCACCTTATACTCAATTGATTTCAGAGGTTGTATTGCCAGCTGTCAGGATATCTGGTATAAATACCTGGCAGGCACGGGATCCTGAACCGATGTTATGGTTTCTGGAATTGTGGGAAAAGTTACTCCCTCAATCAATCCTTGCCAACATATTAGACAATATAGTCATGCCAAAACTATCTAGTGCTGTAGATACATGGGAACCACACCGTGAGACCATTCCAATTCACACATGGGTGCATCCATGGCTACCTCTGCTGGGGCAGAAGTTGGAGGGTATTTATCAGGTGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCTTATGCTATATTGTCTCCTTGGAAATCTGTATTTGATTCTGCTAGTTGGGAACAGCTTATGCTACGGTTTATTGTACCAAAGTTGCAGCTTGTCTTGCAAGACTTCCAAGTGAACCCAGCAAGTCAGAATCTTGATCAGTTTTATTGGGTAATGAATTGGGCTTCTGCTATTCCTGTTCACCTGATGGTTGATATGATGGAAAAATTCTTCTTTGCCAAATGGCTTCAGGTTCTTTATCATTGGTTGTGCTCAAATCCTAATTTTGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGAACTCATTCCAAAAGAATTGTTGGCAAATGAAAGTATCCGGTACCAGCTTAATCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCAGGTTTAAAGGAGAATATAAGCTATCTTAGGGTACTTGAGCAGAGGCAATTTGAGGCTCAACAGAAAGCAGCAGCCTATGCTCAACAGCAAGCTGCTGCTAGCTTAGGCGGTGCAGTCAGCACAGATGGTGTGCATGAATTGAGCTTGAAAGAAGTCATTGAGGCCCATGCTCAGCAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAACGGTCATCAAATATATGGGTTTGGTAATATCAGCATAATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAAACGAAGAAATGTGGTCTATGGAATCTCTTCAAGGCTTGCTAGAGTTGCATAATAAATCCCTTAGTAAAAGGCGCTGA 2607 0.4193 MDEDQEMERFGMDNDYEGGQWIGDEFYYKSRKEKRTQTKDDVLFGVFADSDDDDDYPSRKRRKDRDFSKKADLTKPVNFVSTGTFMPNQENDNKSKDQNEKEGYVSEDRPGLGLGFGMGSGSTSGPGLGFNSGNAANGSERNDDSDENGHDNFLPTAFGKKIKEGAMRREREREKERMEKKRGKHQSLAQDGFSDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEAKLRAKNSGIGFNESKETMPVPVLQQEKKNVQEVSQTVVSKTKERLWSKQARLKKKKEEEYITAEELLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDIPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKKEKEKLETEAAFQKKQLDNMEEIMHVLDRVGEENTLGTLTLESLAQCFRDLHKRCADNYKLCNLSCIACSYAIPLFIRVFQGWDPLRNPSHGLELVSKWRALLQAEDSVDIWDVSSPYTQLISEVVLPAVRISGINTWQARDPEPMLWFLELWEKLLPQSILANILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGQKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKSVFDSASWEQLMLRFIVPKLQLVLQDFQVNPASQNLDQFYWVMNWASAIPVHLMVDMMEKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQQQAAASLGGAVSTDGVHELSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNISIIIDSLNQKVYAQNEEMWSMESLQGLLELHNKSLSKRR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00729 868 Coils Coil 356 404 - -
Spst4g00729 868 ProSiteProfiles G-patch domain profile. 203 248 IPR000467 GO:0003676
Spst4g00729 868 MobiDBLite consensus disorder prediction 124 139 - -
Spst4g00729 868 MobiDBLite consensus disorder prediction 93 107 - -
Spst4g00729 868 MobiDBLite consensus disorder prediction 162 188 - -
Spst4g00729 868 Coils Coil 287 307 - -
Spst4g00729 868 Coils Coil 171 191 - -
Spst4g00729 868 MobiDBLite consensus disorder prediction 75 92 - -
Spst4g00729 868 MobiDBLite consensus disorder prediction 39 189 - -
Spst4g00729 868 MobiDBLite consensus disorder prediction 52 72 - -
Spst4g00729 868 Pfam Tuftelin interacting protein N terminal 4 102 IPR022159 -
Spst4g00729 868 Pfam GC-rich sequence DNA-binding factor-like protein 422 689 IPR022783 -
Spst4g00729 868 PIRSF TFIP11 1 863 IPR024933 -
Spst4g00729 868 Pfam G-patch domain 203 244 IPR000467 GO:0003676
Spst4g00729 868 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 855 IPR045211 GO:0000390
Spst4g00729 868 SMART G-patch_5 201 246 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00729 203 247 C2H2 Transcription Factor Family AT5G26610 48.889 1.90e-07 52.0