Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00689 ATGGCTAAGCATGATGTTGAGGGTGGTTCCTTCTCTGAAAAGGACTACCATGACCCTCCTCCAGCACCTTTGATTGATGCTGAGGAACTCACACAGTGGTCCTTCTACAGGGCCTTGATTGCTGAGTTCATTGCCACACTGCTCTTCCTTTACATCACAGTGCTCACTGTCATTGGTTACAATAGCCAGAGTGATGTCAATGCTGGGGGTGATCTCTGTGGTGGGGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATCTCAGGGGGTCACATAAACCCAGCAGTGACTTTTGGACTCTTCTTGGCTCGGAAGGTGTCTTTGATAAGGGCTATAATGTACATGGTTGCTCAGTGCTTGGGGGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAATGCTTACTACGACAGGGATGGTGGTGGGGCCAATGAGCTGAGTGAAGGGTACAGCACAGGTGTTGGATTGGGTGCTGAGATCATTGGAACCTTCGTTTTGGTGTACACTGTCTTCTCTGCTACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTCCCGGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTTATGGTTCACTTGGCAACCATCCCAGTCACTGGCACTGGTATTAACCCTGCTAGGAGTCTTGGAGCTGCTGTCATATACAACCAAAAGAAGGCAATGACCATTGGATATTTTGGGTTGGACCATTCATTGGAGCAGCCATTGCAGCCTTCTACCACCAATTCATCTTGA 801 0.4856 MAKHDVEGGSFSEKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATLLFLYITVLTVIGYNSQSDVNAGGDLCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQNAYYDRDGGGANELSEGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQKKAMTIGYFGLDHSLEQPLQPSTTNSS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00689 266 MobiDBLite consensus disorder prediction 1 20 - -
Spst4g00689 266 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 4 243 IPR034294 -
Spst4g00689 266 SUPERFAMILY Aquaporin-like 29 239 IPR023271 -
Spst4g00689 266 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 Pfam Major intrinsic protein 29 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Spst4g00689 266 Gene3D Glycerol uptake facilitator protein. 22 250 IPR023271 -
Spst4g00689 266 CDD MIP 37 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst4g00689 266 FunFam Probable aquaporin PIP1-2 22 248 - -
Spst4g00689 266 NCBIfam MIP family channel protein 41 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00689 Spst-Chr4 23283793 23291065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00689 1 241 Major Intrinsic Protein MIP AT2G37170 84.298 4.56e-148 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00689 K09872 - gmx:547857 464.151