Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00678 ATGTATAGTGATATAGGTCTTGTTGCGGAGCTGACATGGGAAAATGGTCAACTTTCTATGCATGGCTTAGGGCTACCGCGTGTGCCGGTGAAGCCCCCCACAAGCGCCGGGAGCAAGTACACATGGGAGAAACCTCGCGCCAGTGGCACCTTGGAATCCATAGTGAACCAAGCCACGAGCTTGCCGCACCGCGGAAAGCCAACGCTGAACGGAGACGGCAGCGTGTATGGGAACTTCGTGGTGCCGTGGTTCGACCCTAACGGGAGTGCCACGGCGGCAAACACGGTGACGATGGACGCATTGGTGTCGTGCACGAAGCGGGAGCAGAGAAAGCAGGGCATGGAGTCGGTTCCCAGCACGTGCATGGTGGGGTGCTCCACACGTGTGGGGTCGTGCTGCGGCAACCAGGGCGCGAAGGGGCAGGAGATGAGTGGGAGGGATCAGAGTGTGAGTGGCAGTGCCACATTCGGGAGGGATAGCAAGCAGGTGACCCTTGACACGTGCGACAGGGATTTTGGTGTAGCTTTCACTTCCACCTCCATCAACTCCCTCGACAACACCAACTCCGCTAAGCCCTGCACCAAAACCACCACCGTCGACGACCATGATTCTGGTGAAGACGGGGACGAAGAAAAGAAAAAGAGAGGAAACGGAAAATCTTCAGTTTCCACTAAAAGGAGTAGAGCTGCGGCCATACATAGCCAATCTGAAAGGGTAAACGTTGAATCAATTTTGCAAGTTGCAATGATGATATTGCAACAACAAAATCAACAATTTGATGTTCATTTGGTTCATTTTCGCATTGGCTTTTCAGAAAAGGAGGGATAA 828 0.5338 MYSDIGLVAELTWENGQLSMHGLGLPRVPVKPPTSAGSKYTWEKPRASGTLESIVNQATSLPHRGKPTLNGDGSVYGNFVVPWFDPNGSATAANTVTMDALVSCTKREQRKQGMESVPSTCMVGCSTRVGSCCGNQGAKGQEMSGRDQSVSGSATFGRDSKQVTLDTCDRDFGVAFTSTSINSLDNTNSAKPCTKTTTVDDHDSGEDGDEEKKKRGNGKSSVSTKRSRAAAIHSQSERVNVESILQVAMMILQQQNQQFDVHLVHFRIGFSEKEG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00678 275 MobiDBLite consensus disorder prediction 137 156 - -
Spst4g00678 275 MobiDBLite consensus disorder prediction 196 218 - -
Spst4g00678 275 MobiDBLite consensus disorder prediction 222 236 - -
Spst4g00678 275 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 8 238 IPR031066 -
Spst4g00678 275 MobiDBLite consensus disorder prediction 186 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00678 Spst-Chr4 21123757 21125487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00678 8 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 46.032 1.87e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00678 - - vra:106780284 379.407