Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00671 ATGGAAGATTCAGAGGAGGAAGAGTTTCTGAATCTTACTCTTTCGATTGCTGCAGGTAAGGAGAGGACAAAGAAAGGAAGGACAAGGGATGCAAATGCTAATTCTATTGTTTTTCCAATGAATTCCAATGAAGGGTACGAAGGGAAGATCTTTAGGCTCCTTCAAATGAGGGAGCTGATGCTAAGAGAAGATCAAAGAAGAAAAGGAGTGGTTGAAGATGGGAATAATGGGCTTCCCTTGATTCATCTGCTTCTTTCAGCCGCCACTTCTATTGATGAAAGAAACCTCTGTGCAGCTCTAGAGAATCTCATTGACTTGTACCAAACAGTTTCCCTAATAGGTGATTCAGTTCAACGTGTGGTGGCCTATTTTGCTGATGGTTTGGCTGCAAGGCTTCTCACAAGAAAGTCCCCTTTCTATGACATGGTCATGGAAGAACCAACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCTTATTACCAATTTGCTCACTTCACAGCAAACCAGGCTATTTTAGAGGCCTATGAAGAGGAGGAAGAGAAGAACAATAAAGCACTTCATGTCATTGACTTTGATGTCTCTTATGGCTTCCAATGGCCTTCTCTTATTCAATCACTTTCTGAAAAGGCAACCAGTGGCAACAGAATATCCTTCAGGATAACAGGTTTTGGGAACAACCTGAAAGAACTACAAGAAACTGAGGCCAGATTAGTTAGCTTCTCAAAGGGGTTTAGTAACCACCTTCTGTTTGAATTCCAAGGGATGTTAAGAGGCTCATCAAGACTCATCAACATAAGGAAAAAGAAAAATGAAACTGTGGCAGTCAACCTTGTTTCTTACTTGAACACTTTGAGTAGTTTCATGAAGATTTCTGACACATTGGAATATGTTCATTCTCTTAGCCCCTCCATGGTGGTGTTGGTGAAACAAGAAGGTAGCAGGAGTGTTAAGACCTTCTTGTCAAGGTTCACCGAGTCTTTGCACTATTTTGCAGCCATGTTTGATTCACTAGACGATTGCTTGCCACTTGAGAGCACTGAGAGGTTGAGGATTGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTAAACTATGATATGGATGGAATGGATTGCCCAAAGTATGAGAGGATGGAAACATGGAAAACAAGAATGGAAAATCATGGGTTAATTGGAAGAAAAATTAGCTCAAAGTGCGTGATCCAAGCAAAGCTGCTTCTGAAGATGAGGACCCATTATTATCCACTACAGCTTGAGGAAGAGGGTGGAAGTGGGGGTTTCAGAGTTTCTGAAAGGGATGAAGGAAGAGTTATCTCTTTGGGGTGGCAAAATAGGTTTCTTCTTACAGTCTCAGCATGGCAACCAGTTTGA 1392 0.4159 MEDSEEEEFLNLTLSIAAGKERTKKGRTRDANANSIVFPMNSNEGYEGKIFRLLQMRELMLREDQRRKGVVEDGNNGLPLIHLLLSAATSIDERNLCAALENLIDLYQTVSLIGDSVQRVVAYFADGLAARLLTRKSPFYDMVMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEEEKNNKALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISFRITGFGNNLKELQETEARLVSFSKGFSNHLLFEFQGMLRGSSRLINIRKKKNETVAVNLVSYLNTLSSFMKISDTLEYVHSLSPSMVVLVKQEGSRSVKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGMDCPKYERMETWKTRMENHGLIGRKISSKCVIQAKLLLKMRTHYYPLQLEEEGGSGGFRVSERDEGRVISLGWQNRFLLTVSAWQPV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00671 463 ProSiteProfiles GRAS family profile. 71 461 IPR005202 -
Spst4g00671 463 Pfam GRAS domain family 80 461 IPR005202 -
Spst4g00671 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 77 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00671 Spst-Chr4 19472790 19474181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00671 66 461 GRAS Transcription Factor Family AT1G14920 33.252 3.51e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst4g00671 GRAS 8.9e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00671 - - gmx:100798251 773.852