Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00666 ATGGAAAAGAACCTGGATGCGAATTCTGGCAGTTTCTCTCCCAAAAAGGAGGACATAAACACGGGTGACACTCCTCATTTGCCAGTGCCGGAATCTGAAGAAGCCGCGGATTCAGAAAAGGCCGGGGATTCAGAAAAGGCCGAAGATTCCAAAAAGGCCGGGGACTCAGAAAATACGGGGGATTCAGAAAAGGCCGCGGATTCAGATAAGGCCGTGGATTCAGAACAAGTTGCGGGAGAGGAGGAATCTAAAGAGGAGAAGCAGGGACAAGAAGGATCCAAAGAGGAGAAGAAGGTAGAAGAGGGATCCAAAGAGGAGAAGAAGGAAGAAGAAGAATCCAAAGAGGAGAAGAAGGAAGAAGAGGAATCCAAAGAGGAGAAGAAGGAAGAAGAGGAATCCAAAGAAGAGAAGAAGGAAGAAGAAAAAGAAGAAACCGTGGAGGCTGAACCGGAATCTCCGCCTCCGAGCCTCGAGAAGGTCTCAGAAGAGATTGATCAATATCTCGTGACATTACAACGAAATGTCGATGCCAAAGAATCCGCCACATTGGAACTCCCTACTTTCCTCCCTATTTTCTTGCATCTGATGGATCAGAAGATAGCGAAGTACGACACAGGTGAAACGAAATGGGGAGAAACAACTGAAGAGGATTCCTCCCTTTTGGAATGCGTGAATCGCGTTTCGAAGCTGATGAAGCATTTCACAGACTACTCTCAGTCTGACGTAGAGGAAGAACTGGAGGATAAAGACATGGACAAGGATGACGACATGGGGAAGGGCAAACTGGACTTCATGATCAACGACATCGGCGTGATTCAGCAGCGCGTGATGTCGTTTTTGGAGGACGCGTTCCGTACTCTTATGGAAGAATCTAGAAACCCAAACAAACCAGACTCGAAAGGAAAACAACCTGTGGCGGACTCCTCGGAGTCCGAACCGCCTGAAGAAATAGTTCCGGAATTCCCAGGTTTCACGGAGGAAACGATAACGAATCTGAGCAAAATCGCCAAGGAGATGATAGCCGGTGGTTACGAAAATGAGTGTTACCAAGTTTACACCCTTTCTCGGAGGCACGCGTACGAGGATGGCATGCAGAAGCTTCTAGGGTACGAGAAGCTCAGCATAGATGAGATTCAGAGAATGCAGTGGGAGCCACTGGAACGCGAAATCCCGACGTGGATCAACACTTGGAAGGAATGCACCACTGTATGGTTCTGCGGCGAGAGAAAGCTCGCCGAAGCGGTCTTCGCCAACGAGACGGAAACCGTGGCGAGCATCATGGGCAACCTCTCCCGCCCAATTGTCATTCAACTGCTTAATTTCGCGGAGAGCATTGCCATGACAAAGCGCGCCGGAGAAAAACTCTTCAAACTCTTGGACATGTACGAGACTCTACGAGACGCGATTCCAATAATGGAAACCTTGTTCCCCAATGACATTATCGGGGAAATCAAGGCCGAGACAACATCAGCAAAATGTCGTCTCGGCGAGGCAGCGGTGTTGATATTCTGTGACCTGGAGAATTCGATTAAATCGGAGACCGGGAAAACCCCGGTGGCTGGCGGCGCGGTGCATCCTCTGACACGCTACATAATGAACTACCTAAGGCTAGCTTGTGAGTATAAAGGCACATTGGAGGAAGTGTTCAAAGAGCATTCGAAAATCGAGCGTGCAGATTCAACGAGCAGACCTCGTTATGAAACCGAGGAGTGCAAACTGAAGAGCCAGGACAAACCGAAAGAGGTCTCGCCGTTTGCAGCACAATTAATGAGGGTGATGGAGCTTCTGGACTCGAATCTGGAAGGGAAGGCGAAGCTGTACAGGGAGGTTGCGTTAAGCTGCATTTTCATGATGAACAATGGAAGGTACATAGTGCAGAAGATAAAAGGTTCTGCGGAGATCTACGAAGTGATGGGGGAAACATGGTGTCGTAAGAGATCGACGGAGCTGAGGACTTACCATAAGAACTACCAGGTGGAGACGTGGAGCAAGATTCTGAGTTTCCTGAGCCCTAAAGGGTTGAGCGATCGCGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGCGGTTCAAGTCATTCAACGCAGCGTTTGAGGAGATCCACAAGACGCAGAGCATGTGGGTGGTGAGCGATGAACAGCTTCAATCGGAACTTAGGGTTTCGATCTCTGCACTCGTGATTCCTGCGTACAGATCTTTCTTGGGGAGGTTTTCGCAGTATTTGGACCCGGGAAGACAAACCGAGAAGTATGTAAAGTACCAAGCTGAGGATATAGAGACTTACATTGACGATTTGTTCGATGGGAACCCGCACGGGCGTCGCTAG 2322 0.494 MEKNLDANSGSFSPKKEDINTGDTPHLPVPESEEAADSEKAGDSEKAEDSKKAGDSENTGDSEKAADSDKAVDSEQVAGEEESKEEKQGQEGSKEEKKVEEGSKEEKKEEEESKEEKKEEEESKEEKKEEEESKEEKKEEEKEETVEAEPESPPPSLEKVSEEIDQYLVTLQRNVDAKESATLELPTFLPIFLHLMDQKIAKYDTGETKWGETTEEDSSLLECVNRVSKLMKHFTDYSQSDVEEELEDKDMDKDDDMGKGKLDFMINDIGVIQQRVMSFLEDAFRTLMEESRNPNKPDSKGKQPVADSSESEPPEEIVPEFPGFTEETITNLSKIAKEMIAGGYENECYQVYTLSRRHAYEDGMQKLLGYEKLSIDEIQRMQWEPLEREIPTWINTWKECTTVWFCGERKLAEAVFANETETVASIMGNLSRPIVIQLLNFAESIAMTKRAGEKLFKLLDMYETLRDAIPIMETLFPNDIIGEIKAETTSAKCRLGEAAVLIFCDLENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKGTLEEVFKEHSKIERADSTSRPRYETEECKLKSQDKPKEVSPFAAQLMRVMELLDSNLEGKAKLYREVALSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSFLSPKGLSDRGKVQKPVLKERFKSFNAAFEEIHKTQSMWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYVKYQAEDIETYIDDLFDGNPHGRR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00666 773 MobiDBLite consensus disorder prediction 30 144 - -
Spst4g00666 773 MobiDBLite consensus disorder prediction 289 323 - -
Spst4g00666 773 SUPERFAMILY Cullin repeat-like 214 766 IPR016159 -
Spst4g00666 773 MobiDBLite consensus disorder prediction 1 161 - -
Spst4g00666 773 MobiDBLite consensus disorder prediction 1 18 - -
Spst4g00666 773 Coils Coil 99 149 - -
Spst4g00666 773 Gene3D Exocyst complex component Exo70 203 773 - -
Spst4g00666 773 Pfam Exo70 exocyst complex subunit 393 763 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst4g00666 773 PANTHER EXOCYST COMPLEX PROTEIN EXO70 172 767 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00666 Spst-Chr4 18732919 18735240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00666 156 768 EXO70 exocyst subunit family AT5G13990 51.863 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00666 K07195 - gmx:100819960 915.605