Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00652 ATGGGAAGTAGGCTTCATCTTTCGGTGGTTCTGATTTTGGTAACAGTTTTACTTTCAATCTTTCACTCAGAGCAACTGCAATCCTCTCACTCTCAGACCCTTCTAAGAATTCAACAGCTATTGAACTTTCCAGCTGTTTTAAGCAGTTGGAACAACAATACAGACTTTTGCAGCACAGATTCAACATCATCTCTCAATGTTGTGTGCTATGATGGAACCATAACCCAGCTGCACATAGTTGGTGAAACAAGAGCTCTACTTCTCCCTAAAAATTTCTCAATAGAATCCTTTGTCACAACACTGGTTAGGCTTCCCAGTCTGAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCAGGTAAGATTGCTTGTTTGTCATCACTGGAAATTGTCAATGTGAGTTCAAATTTCCTATATGGTTCCATCCCTCCAGAGTTCTCATTACTGTCACATCTCCAAACACTCATTCTAGATGACAACATGTTTTCTGGCCGCCTTCCTCAATGGCTTGATTCCTTTCCAGCCTTAACTGTGCTAAGTTTGAAAAACAACTTGTTCAATGGTTCACTTCCGAATTCGCTGGGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCTCATAACCATTTTTACGGACCAGTGCCTGATTTGCGTCGCTTGAGGAATCTCCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCGGTTTCCCCAGCTTGGTGACAAATTGGTTACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGCATCCCTGATGAATTGAGCTCATGTTATCAGCTGGAGAGACTTGACATCTCAGCAAACACATTTGTTGGACCATTCCAACTTGCACTGATGTCACTTCCTTCTATTACTTACCTGAACATTTCTGGGAACAAATTAACAGGAATGCTTTTGGAGAATCTTTCTTGCAATCCTGGACTTGAAACAGTGGATTTATCCTCAAATCTTTTAACTGGGAGCTTACCAAAATGTTTAATGTCAAATTCCAATGATAGAACTGTCCTGTATGCTAGAAATTGTCTAGAAGAGACAAATCAAAATCAGCATGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAATAGTACCTGAGGGAAAGAAGCACAAACGAGTATCTAAGGAAGTTCTCTCCCTTGGGATAGTATGCGGAACTTTGGGAGGTGTAGCAATTGTTGCATTGCTTTTCTTTATTATTACCAAAAGAGATGTCAAAATAAAGATCAAGAATCATCAAACAAAGTTAATATCAGAGAATGCAGCTTCAGGATATTCCTCTAAGTTACTCTCCGATGCATGGTATATATCTCAAACAATGAAGTTCGGAACAGTTGGTCTGCCACCTTATCGAGTTTTCTCACTGGATGAGATTGTAGCAGCTACAAACAACTTTGACTTGGCTTGTTTAATGGGTGAAGGATCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGACGGCTTACTTGTTGCCATTAGAAGTGTAAAAATAACCAAGAACTACAGCACTCAAGATTTTATGCAAAACATAGAGCAGATATTCAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGATACTGCTTTGAATGTTATTTGGATGATTCAAGCGTTCGCAGCATATTTGTTGTCTTTGAGTATGTACCAAATGGCACACTCAAGAGCTGGATCTCAGATAGGCACTATAGAAAATCCCTGACATGGATGCAACGCATAGAAACTGCAATTGGAGTAGCAAAAGGCATCCAATATTTGCACACAGGGATTGTACCTGGTGTATATTCAAACAATCTCAAAATCACAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAGCAGTTACGAACTGCCTTTGTTATCCAACTTGAGGAAGGTTGGGCACGGTAATCCTTACAGAGAATTCCAAAGTCCTAGCACTAACAAAAGTGCAAAACAGGAAGACAAGTCTGATGTATATGACTTCGGAGTAATTCTACTGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCAAGCATAACAGCTGATGGTGAATCTAGGAGGAGCATTATAGATCCAGCAGTTCGCAAGGTGTGCTTAGATCAATCATTAAAGACAATGATGGAAATTTGTGTGAGGTGCCTTGTCAAAGAGCCAGCAGAGAGGCCCTCTATTGAGGATGTTTTGTGGAATCTGCAGTTTGCAGCTCAAGTCCAAGATGCATGGAGAGGAGACTCTCAAAGTTGTAGTGATGGCTCACCCATCTCACCTTTAGCATCAAGACGAATGACCTTCCATTAG 2352 0.4052 MGSRLHLSVVLILVTVLLSIFHSEQLQSSHSQTLLRIQQLLNFPAVLSSWNNNTDFCSTDSTSSLNVVCYDGTITQLHIVGETRALLLPKNFSIESFVTTLVRLPSLKVLTLVSLGIWGPLPGKIACLSSLEIVNVSSNFLYGSIPPEFSLLSHLQTLILDDNMFSGRLPQWLDSFPALTVLSLKNNLFNGSLPNSLGSLENMRILSLSHNHFYGPVPDLRRLRNLQVLELDDNAFGPRFPQLGDKLVTLVLRNNKFRSSIPDELSSCYQLERLDISANTFVGPFQLALMSLPSITYLNISGNKLTGMLLENLSCNPGLETVDLSSNLLTGSLPKCLMSNSNDRTVLYARNCLEETNQNQHALPFCHTEAIAVGIVPEGKKHKRVSKEVLSLGIVCGTLGGVAIVALLFFIITKRDVKIKIKNHQTKLISENAASGYSSKLLSDAWYISQTMKFGTVGLPPYRVFSLDEIVAATNNFDLACLMGEGSQGKMHRGQLKDGLLVAIRSVKITKNYSTQDFMQNIEQIFKYRHRHLVSVLGYCFECYLDDSSVRSIFVVFEYVPNGTLKSWISDRHYRKSLTWMQRIETAIGVAKGIQYLHTGIVPGVYSNNLKITDVLLDQNFVAKISSYELPLLSNLRKVGHGNPYREFQSPSTNKSAKQEDKSDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGESRRSIIDPAVRKVCLDQSLKTMMEICVRCLVKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSCSDGSPISPLASRRMTFH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00652 783 Gene3D Ribonuclease Inhibitor 148 240 IPR032675 -
Spst4g00652 783 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Spst4g00652 783 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Spst4g00652 783 SUPERFAMILY L domain-like 76 353 - -
Spst4g00652 783 ProSiteProfiles Protein kinase domain profile. 477 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00652 783 MobiDBLite consensus disorder prediction 762 783 - -
Spst4g00652 783 Gene3D Ribonuclease Inhibitor 241 356 IPR032675 -
Spst4g00652 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 765 - -
Spst4g00652 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Spst4g00652 783 SUPERFAMILY Protein kinase-like (PK-like) 457 751 IPR011009 -
Spst4g00652 783 PANTHER UNNAMED PRODUCT 86 679 - -
Spst4g00652 783 Pfam Protein tyrosine and serine/threonine kinase 482 746 IPR001245 GO:0004672|GO:0006468
Spst4g00652 783 Gene3D Transferase(Phosphotransferase) domain 1 560 766 - -
Spst4g00652 783 Gene3D Phosphorylase Kinase; domain 1 447 559 - -
Spst4g00652 783 Gene3D Ribonuclease Inhibitor 29 147 IPR032675 -
Spst4g00652 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00652 Spst-Chr4 16420089 16425047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00652 43 777 Miscellaneous Gene Families AT3G03770 60.946 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Spst4g00652 PK_Tyr_Ser-Thr 9.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00652 - - gmx:100813207 1356.66