Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00614 ATGGGGAAAAAAGGAAGCTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTGCAGATTCCAAAAAAGATAAGAAAAAACAGAAAAGCCACAATTCAAAGAAAGCAAGCAGTGACAAGGATGGGGAAGTAGCAGCAGCAGTTGTTCTTCCACAAATAGAAGATGTTAAATTAATTGAGGCTGAGAAGGAACAAAGCAAGCATGCTGCTTCTTTGGCTTTTGCCACTGCTGTTGCTGCAGAGGCTGCTGTTGCTGCTGCTCAGGCTGCTGCAGAGGTTGTTCGTCTGACAAGTATGCCACATCACACTGGAAAGACCAAGGAAGAAATTGCAGCTATCAGGATTCAGACTGCATTTCGTGGACATATGGCAAGAAGAGCATTGCGTGCCTTGAGAGGTTTGGTGAGGTTGAAAACCTTAGTGCAAGGGCAATCTGTTAAACGACAAGCTACTAGCACTCTACGAAGTATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAAGAGAACCTAGCTCTTCAGCGCCAACTGCAGCAGAAACATGAAAAAGAACTTGAGAAGCTGCGTGCTGCTCAGGTTGGAGAAGAATGGGATGATAGTTGGCAGTCAAAGGAGCAAATTGAAGCCAAATTGTTGCACAAGCAAGAAGCTGCTTTAAGAAGAGAGAGAGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGCTCTTCAAAATCATTAAATCCCACATTTATGGATCCAAACAATCCCCAATGGGGGTGGAGTTGGCTAGAGAGGTGGATGGCAACTAGGCCATGGGATGGCCACAGAACTGTGGATCACAATGATCATGCATCTGTGAAGAGTGCAGCAAGCCGTGCCATGTCAGTTGGAGAAATCACCAAAGTGTATTCTCTCCAAGACCATAGCCATGACAAAAGACCTTCCCCTTTTGGCCAAAAACCAAGAAGACCAGTCCATCACATTTCCCCTTCAAAGGCACCATCTGCTAATGGCAAGGCAAGGCCATCAAACTCAAAGGGTAGTGTCTGGGGAGGAGATGAGGACTCAAGAAGCATGTTCAGCGTTCAATCAGAGCGATATCGACGACACAGCATTGCAGGATCCTCAGTGAGAGATGATGAGAGCCTTGCAAGCTCCCCTGCCATTCCAAGTTACATGGCACCTACAAGCTCAGCCAAGGCCAGGTCCAAAATCCAAAAGCCTTCACCTGAAAAAGAAGGTGCTGCAGTAAGAAAACGCCTTTCTTTCTCACCTTCTGCTGCTGCTTCAAGAAGGTACTCTGATCCTCCTAAGGTGGAAATTGTTTTCAACAAGGATGCTGCTGCAACTATTAGCAATGGAAGGGGAAGGTAG 1380 0.4587 MGKKGSWFSAVKKVFSADSKKDKKKQKSHNSKKASSDKDGEVAAAVVLPQIEDVKLIEAEKEQSKHAASLAFATAVAAEAAVAAAQAAAEVVRLTSMPHHTGKTKEEIAAIRIQTAFRGHMARRALRALRGLVRLKTLVQGQSVKRQATSTLRSMQTLARLQSQIRERRIRMSEENLALQRQLQQKHEKELEKLRAAQVGEEWDDSWQSKEQIEAKLLHKQEAALRRERALAYSFSHQQTWKGSSKSLNPTFMDPNNPQWGWSWLERWMATRPWDGHRTVDHNDHASVKSAASRAMSVGEITKVYSLQDHSHDKRPSPFGQKPRRPVHHISPSKAPSANGKARPSNSKGSVWGGDEDSRSMFSVQSERYRRHSIAGSSVRDDESLASSPAIPSYMAPTSSAKARSKIQKPSPEKEGAAVRKRLSFSPSAAASRRYSDPPKVEIVFNKDAAATISNGRGR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00614 459 MobiDBLite consensus disorder prediction 391 406 - -
Spst4g00614 459 MobiDBLite consensus disorder prediction 371 439 - -
Spst4g00614 459 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Spst4g00614 459 SMART iq_5 105 127 IPR000048 GO:0005515
Spst4g00614 459 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Spst4g00614 459 MobiDBLite consensus disorder prediction 305 358 - -
Spst4g00614 459 MobiDBLite consensus disorder prediction 306 320 - -
Spst4g00614 459 Coils Coil 177 197 - -
Spst4g00614 459 PANTHER IQ-DOMAIN 5-RELATED 1 438 - -
Spst4g00614 459 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00614 Spst-Chr4 13879342 13883158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00614 1 458 IQD Protein Family AT5G03040 48.361 9.81e-134 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00614 - - gmx:100809448 676.011