Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00590 TTTTTTTCTCTCTACTCTTCTCCCACAGAGGATCAGAAAAGGGATAAGATTGCGAAGCTGCCAGGACAACCAGAGAATGTGGTGTTTGATCAGTACTCAGGCTATGTGACTGTGGATAACGAAGCTGGGAGAGCATTGTTTTATTGGCTGGTTGAGACACCAGATAGTAGTTCAAAGCCATTAGTGTTGTGGCTTAATGGTGGCCCTGGATGCTCCTCTATTGCTTATGGAGCAGCTGAAGAAATTGGTCCTTTTCGAATCAATTCTGATGGGAAATCACTTTACTCTAATCCTTATGCTTGGAACAAATTGGCAAATATACTCTTCCTTGATTCTCCCGCTGGTGTTGGCTCTTCTTATTCCAACACAACATCAGATCTGCATACAGGAGACAAAAAAACAGCTGAAGATTCATATGCATTCCTTGTTAATTGGCTTGAGAGATTTCCTCAGTACAAGCATAGAGATTTCTACATTGCTGGAGAAAGTTATGCCGGTCACTATGTTCCTCAGTTGTCTCAAGTTATTTATCGCAAAAACAAAGGAATCGAGAACCCAGATATAAATTTCAAGGGGTTTATGGTTGGAAATGCTGTGATTGATGATTACCATGATTATATTGGAACATTTGAGTACTGGTGGGTCAATGGTTTGATTTCCGATGCCACATATAAGTTGTTGAGAATTGTGTGTGAGTTTGATTCCGCTCAGCATCCACCAGAGAAATGCGAGGAAGCTTTTGAACTTGCAAGTTTGGAGATGGGAGACATTGATCAATACAGCATTTATACACCTGTGTGCAACCGTACAGCTGCAACACTCAAAAGCCGATTAAGGGGTCGCTTGTTGATTTTTAATTTTAAAACTCAGGCATGGATGTCTCGGGCATACGATCCCTGCACTGAGAGGTACTCTGACGTGTATTTCAATAGTCCAGAGGTTCAGAAGGCTCTTCACGCCAACGTAACTGGGATTCCTTATTCATGGACTGGATGCAGTGACATTGTTGGGGAAACCTGGGGTGATTCTCCCCTTTCTGTGCTTCCAATATATCAAGAATTTCTTGACGCTGGCCTCAGGATATGGGTGTTCAGTGGAGACGCTGATGCAGTGGTGCCTGTAACCGCAACTCGGTATTCAATTGCTTCCTTGAACCTTCCTACCATCACCAATTGGTACCCTTGGTATGATAATGGCGAGGTTGGTGGGTGGAGTCAAGTTTACAAGGGGCTTACATTGGTTACAGTAAGAGGGGCAGGACATGAGGTTCCACTTCATAGACCTCGTCAAGCTTTTACTCTTTTCAAATCATTCTTGGAGAATACGAACATGCCATTGTCAAGTGCTACCAGCCTTACTCACCCAACTCAGTCACTGAACCATAAAATTAGGTCTGTTAGGCCCAAAAGAAAGATCGTTATGCCATCATCCATGCAGGACTTTACTAGTTAG 1452 0.4311 FFSLYSSPTEDQKRDKIAKLPGQPENVVFDQYSGYVTVDNEAGRALFYWLVETPDSSSKPLVLWLNGGPGCSSIAYGAAEEIGPFRINSDGKSLYSNPYAWNKLANILFLDSPAGVGSSYSNTTSDLHTGDKKTAEDSYAFLVNWLERFPQYKHRDFYIAGESYAGHYVPQLSQVIYRKNKGIENPDINFKGFMVGNAVIDDYHDYIGTFEYWWVNGLISDATYKLLRIVCEFDSAQHPPEKCEEAFELASLEMGDIDQYSIYTPVCNRTAATLKSRLRGRLLIFNFKTQAWMSRAYDPCTERYSDVYFNSPEVQKALHANVTGIPYSWTGCSDIVGETWGDSPLSVLPIYQEFLDAGLRIWVFSGDADAVVPVTATRYSIASLNLPTITNWYPWYDNGEVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFTLFKSFLENTNMPLSSATSLTHPTQSLNHKIRSVRPKRKIVMPSSMQDFTS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00590 483 Gene3D alpha/beta hydrolase 9 279 IPR029058 -
Spst4g00590 483 SUPERFAMILY alpha/beta-Hydrolases 13 444 IPR029058 -
Spst4g00590 483 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Spst4g00590 483 Gene3D - 347 440 - -
Spst4g00590 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Spst4g00590 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Spst4g00590 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Spst4g00590 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Spst4g00590 483 FunFam Carboxypeptidase 347 441 - -
Spst4g00590 483 ProSitePatterns Serine carboxypeptidases, histidine active site. 411 428 IPR033124 GO:0004185
Spst4g00590 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 428 IPR001563 GO:0004185|GO:0006508
Spst4g00590 483 FunFam Carboxypeptidase 11 269 - -
Spst4g00590 483 Gene3D - 300 336 - -
Spst4g00590 483 Pfam Serine carboxypeptidase 21 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00590 Spst-Chr4 12678527 12683113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00590 310 439 Calmodulin-binding Proteins AT2G22960 30.534 6.10e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00590 K16297 - gmx:100796815 769.229