Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00578 ATGGGATCTCAAGTTGGGGCAGTTCAAGAGTCAAAGACTACTACCCCTTTGGTTAGACAAGGATCCTTGTACAATCTGACCCTCGATGAGGTGCATAACCAGCTTGGGAATTCGGGGAAGCCACTTGGCAGCATGAATCTTGATGAGTTGTTGAAGAGTGTGTGGAGTGCTGAAGTTGGTGGTGAGGCCCCTGGTTTGGACTTTGGTGGTGGTGATGCTGACATGCAGCATGCCCCGGCTGCTTCTTGCTCCTCTCTGAATCCTCAGGGGAGCCTAGCTTTGTCAAGGGATCTTAGCAGGAAAACTGTTGATGAGGTGTGGAGAGATATGCAGCTGAAGAAGGGTTCTAATAGGGATAATAAAACCCAGGAAAGACAGCCTACACTGGGTGAGATGACTCTGGAGGATTTCTTGGTGAAGGCTGGAGTGGTTGCTGATTCAAATGGGGCTTTCTCACAACATAGCCATTGGGTGCAATACCAGCTCCCTTCAGTGCAGCAGCAGAATATGATGGGGGGTTATGTTGCTGGCCATGCCATTCAGCAGCCTTTCCAGGTTGCGGTGAACCTAGTTCTGGATGCTGCTTACACCGAGACGCCCACTTCTTTAATAGGAGCGTTATCGGATACACAAACTCCCAGTCGAAAAAGGGAGGCCTCTGGTGATGTGGTAGAGAAAACTGTGGAGAGGAGGCAGAAAAGAATGATTAAAAATAGAGAATCTGCTGCTCGATCTCGGGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTAAGCAATTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATCGAGAGGGCATTGCCATCTGTGCCACCACCTGAGCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCCATCTTTTGA 903 0.4862 MGSQVGAVQESKTTTPLVRQGSLYNLTLDEVHNQLGNSGKPLGSMNLDELLKSVWSAEVGGEAPGLDFGGGDADMQHAPAASCSSLNPQGSLALSRDLSRKTVDEVWRDMQLKKGSNRDNKTQERQPTLGEMTLEDFLVKAGVVADSNGAFSQHSHWVQYQLPSVQQQNMMGGYVAGHAIQQPFQVAVNLVLDAAYTETPTSLIGALSDTQTPSRKREASGDVVEKTVERRQKRMIKNRESAARSRARRQAYTQELEIKVKQLEEENERLRRLNEIERALPSVPPPEPKHQLRRTSSAIF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00578 300 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 228 280 - -
Spst4g00578 300 MobiDBLite consensus disorder prediction 277 300 - -
Spst4g00578 300 MobiDBLite consensus disorder prediction 206 226 - -
Spst4g00578 300 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 233 248 IPR004827 GO:0003700|GO:0006355
Spst4g00578 300 Gene3D - 228 280 - -
Spst4g00578 300 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 298 IPR043452 GO:0003700|GO:0045893
Spst4g00578 300 Pfam bZIP transcription factor 230 272 IPR004827 GO:0003700|GO:0006355
Spst4g00578 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 272 IPR004827 GO:0003700|GO:0006355
Spst4g00578 300 SUPERFAMILY Leucine zipper domain 230 275 IPR046347 GO:0003700|GO:0006355
Spst4g00578 300 Coils Coil 246 280 - -
Spst4g00578 300 SMART brlzneu 226 294 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00578 Spst-Chr4 11772720 11775524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00578 1 300 bZIP Transcription Factor Family AT3G56850 54.489 1.06e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst4g00578 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00578 K14432 - gmx:100170741 457.603