Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00546 ATGACGATCACCAACATCCTAGTCTTCTTCATCTTTGTCCTTCCGTTCACTTTCGCTGAGCTACGCGTTGGCTTCTACACCTCAACTTGTCCAGGAGCAGAGACAATTGTACGTGAAGTTGTGCAAAGACATTTCAACCAGGATAATTCCATTGTCGGAGGCCTCCTTCGCTTGCACTTTCATGATTGCTTTGTTAGAGGTTGTGATGCCTCTATACTAATAGATCCAACTAGGAACAGAACATCAGAGAAGAATGCAGGACCGAACCGAACAGCTCGTGGATTTGAGATCATTGATGATGCAAAAGCAGTGTTGGAACAAGAGTGTCCTTTAAGAGTTTCATGTGCTGATATCATAGCACTAGCCACAAGAGATGCAGTGGAAATGGCAGGAGGGATCAGGTACAGAATCCCCACCGGAAGAAAAGATGGTCTGTTGTCTGATCCTGAACTAGTCAAGCTTCCATCACCATCACTCTCTGTGTCAGGTGCTCTTCAATTTTTCACTGCAAAAGGGTTGACACTGGAGGACATGGTGACCCTTTTGGGAGGACACACCGTTGGTTTTGCTCATTGCAGTATGTTTCAAAATAGGCTTTCAGCTATTCAAGGAGGAGTTAATCCTTCAATGGACCCTACGTTGGAGGCAAGATTGGAGCAAATTTGTGAGTTAAGAAGGGCACCAAATAGTGACCCTCTTGTGTTTTTGGACCAAAACACATCCTTTACATTTGACAATGAATTTTACAACCAAATGATTCTGAAGAGAGGGGTGCTTCACATTGACCAGCAATTGGCTTTAGACCCATTGTCAATGGACATGGTGCAGAATTTGGCAACAGATGATAGTTTATTTCAAGAGAAATTTGCGAATGCCATGATAAAGATGGGAAGCATTGGTGTTTTGGATGAGAATGAAGGTGAAGTAAGAAGCAATTGTAGGGCTTTTAATAGGCCTTTGTAG 963 0.432 MTITNILVFFIFVLPFTFAELRVGFYTSTCPGAETIVREVVQRHFNQDNSIVGGLLRLHFHDCFVRGCDASILIDPTRNRTSEKNAGPNRTARGFEIIDDAKAVLEQECPLRVSCADIIALATRDAVEMAGGIRYRIPTGRKDGLLSDPELVKLPSPSLSVSGALQFFTAKGLTLEDMVTLLGGHTVGFAHCSMFQNRLSAIQGGVNPSMDPTLEARLEQICELRRAPNSDPLVFLDQNTSFTFDNEFYNQMILKRGVLHIDQQLALDPLSMDMVQNLATDDSLFQEKFANAMIKMGSIGVLDENEGEVRSNCRAFNRPL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00546 320 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Spst4g00546 320 Gene3D Peroxidase, domain 2 155 296 - -
Spst4g00546 320 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 FunFam Peroxidase 24 164 - -
Spst4g00546 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Spst4g00546 320 Pfam Peroxidase 37 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 Gene3D - 24 317 - -
Spst4g00546 320 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 FunFam Peroxidase 155 296 - -
Spst4g00546 320 ProSiteProfiles Plant heme peroxidase family profile. 20 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PANTHER - 5 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00546 320 CDD secretory_peroxidase 20 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00546 Spst-Chr4 9385134 9386411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00546 2 317 Peroxidase AT4G26010 51.735 3.30e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00546 K00430 - gmx:100816459 495.352