Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00533 ATGCTGGACTGGGAGTCTGCGGCACTGCTCCATTTGATTTCCGACTTTGGACTTACCGCCTTCTCCGACCACCTCAAGGAGGATGGGCTGCTACACACCACGTGCGGCACGCCCGCGTACGTGTCACCAGAGGTCATAGTGAAAAAGGGGTACAACGGTGCCAAGGCTGATATATGGTCATGTGGGGTCATCCTCTATTGTCCACCTTGGTTTTCTGTGGAGGCGCGAAGGCTTGTTACCAGACTCCTCGACCCGAACTCGAATACCCGGATTAGTATTTGTAAAGTGATGGAGTCTTCTTGGTTTAAAAAGCCGGTGCCGTGGAAGGTGGCGGAGGTGGATTTGGAGGTGGATTTGGAGGAGAAGTGTGAGACGCCTGCTACGATAAACGCGTTTCACATAATCTCGTTGTCGGAGGGGTTTAATTTGTCACCGTTATTTGAGGAGAAGAAGAGGGAGGAGATGAGCATGGCGGTGCTGGTGTTCGGCGGCGACATTTGTGCGGCGGAGGCGGCGCGTGAGATGGTGTGGGACCCGCTGCCTTAA 546 0.5421 MLDWESAALLHLISDFGLTAFSDHLKEDGLLHTTCGTPAYVSPEVIVKKGYNGAKADIWSCGVILYCPPWFSVEARRLVTRLLDPNSNTRISICKVMESSWFKKPVPWKVAEVDLEVDLEEKCETPATINAFHIISLSEGFNLSPLFEEKKREEMSMAVLVFGGDICAAEAAREMVWDPLP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00533 181 Pfam NAF domain 126 152 IPR004041 GO:0007165
Spst4g00533 181 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00533 181 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 154 - -
Spst4g00533 181 Pfam Protein kinase domain 13 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00533 181 ProSiteProfiles NAF domain profile. 124 148 IPR018451 GO:0007165
Spst4g00533 181 SUPERFAMILY Protein kinase-like (PK-like) 12 113 IPR011009 -
Spst4g00533 181 Gene3D Transferase(Phosphotransferase) domain 1 7 106 - -
Spst4g00533 181 SMART serkin_6 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00533 181 Gene3D Kinase associated domain 1, KA1 123 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00533 Spst-Chr4 8394512 8395145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00533 13 147 CBL-interacting serine-threonine protein kinases AT4G30960 54.070 6.26e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst4g00533 Pkinase 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00533 - K07198 var:108321114 243.047