Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00519 ATGAGACATTTTTGCTACCTGCATCTTGTGGTTCTTTCATGGTTTTTGTTCATCCCAAACACCCATGAACTACAAGCTGCTCAGACTCAAGCCTTGTTGCAGTTAAGAGTTTATCTAGAGTACCCCTCTTCTTTGCAAGTTTGGGAATATTACCAGGGGGACCTATGCAGCGTCTCACCGTCTGCAAACATGAGCATTAAATGTGAAGAAGATGAGGTAACTGAGCTTAAAATTATGGGTGAAAAATCTTTGAAGCCACCATGGTTCAATGGATTTGCAGTTCCTAATCAAACTCTATCCATGAATTTCTCCATTGATTCTTTTTTGACCACTTTGACAAGGTTGACCAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATACGATTCACAGTTTCCCTTTGCTTCAAGTTTTGGACTTGAGTTCCAATTTCTTATTTGGAGCCATTCCACATAAAATATCCACAATGGTAAAGCTTCATTCACTTACCCTTGATGACAATTATTTTAACACCACTATGCCCGATTCGTTTGATTCTCTGTCCAATCTGAATATCTTGAGCGTGAAGAACAATGGTTTGAAGGGTTCTTTCCCCTCCTCACTGGGCAAAATGAAGACACTTGAAGTTATTTCCTTGTCCCACAATGAGTTGTCTGGTGGCTTGCCCGGTCTCAGTTCTCTCACTGGCCTACATGTTCTGGATTTAAGAGATAACTATTTAGAGTCTGAACTACCATTGTTTCCTAAATCTGTGGTCACAGTGTTGCTTAGCAATAACTCGTTTTCAGGAGAGATACCTAAACAGTTTGATGAACTGGGTCAGCTTCAACATCTTGATCTTTCTTCAAATCACCTCAGTAAGACACCCCCATCTACCTTGTTTTCTCTACCAAAAATAAGTTATTTGAATCTGGCAAGCAATATGCTAACTGGGGCTCTCCCAGACAAACTTAACTGTGGCAGCAAACTTGGATTTGTGGACATTTCTCGTAACAAGTTAAGTGGTGGACTTCCTTCTTGCTTGGCCAATACATCTGATAGTAGAGTTGTTAGATATGCTGGAAACTGTCTATCTGTTGATTCTCTGAACCAGAATAGAGGTTCTTATTGTAAAGAATCTGCCTCTGGATGGAAGAGCTTTAAGACATGGGAAGTAGCTGTAGTAATGGCCATCATTGTTGTACTTGTTCTGGTGCTTTTGGTGTCGGGATTCTTCGTATGGAAAAAGTACCGTTCCAGAAAGACAACTGGGCAGGATGTGTTGCTAAAGATTGTTCAAGATAACTCCTCAACAGGAGTTCCATCAGAGATCCTTGCAAATGCCAGATTTATTTCTCAAACAGTGAAGCTAGGGACACAAACTACTCCAACCTGTCGGCAATTTTCAATAGAGGAATTGAAGGAAGCCACTAAAAACTTTGACTTGTCAAATTATATTGGTCAAGGCTCCATAGGGAAGCTGTACAAAGGTAAACTAGAGAATGGATCCTACGTGGCAATACGATCTTTGGTTCTGTCAAAGAAATGCTCAATTCAAAATCTTAGAGCTAAATTGGATTTACTCTCAAAACTTCAACATCCAAATTTGGTTAGCCTTTTGGGTCATTGTGTTGATGGTGGTGGACAAGATGATTCCAATTCCCACAAACTTCATCTTGTATACGAGTATGTGCCAAATGGAAATTATCATACCCATCTGTCAGAATTTTCTGTAGAGAAGGCACTCCAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGTTTTAGTAACCTACTAAAGACAAAGAATATCTTGCTTGATGAACACCGCATTCCAAAACTAAGTGACTATGGTATGTCCATCATTACAGAAGAAATTGAAAAGTTTGAGGTATGTCCTGGCAACCCAATGTTGCGCCTAAGGACAAAAGCAGATGATGATGTTTATAATTTTGGATTCATATTGTTCGAATCACTTGTTGGACCCATAGCATGCGACAAAGGAGAAACATTCTTTCTAAATGAGAAGGCATCCTTTGGCAGTGAAGATGGTAGAAGAAAGATTGTGGATCCTATAGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATATCAATAACAACCAAATGCATATCTCCAGAATCTTCATTTCGCCCCTCTTTTGAGGATGTCTTGTGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAACAGATGCAGACCAGAAATCAGATTAA 2289 0.4015 MRHFCYLHLVVLSWFLFIPNTHELQAAQTQALLQLRVYLEYPSSLQVWEYYQGDLCSVSPSANMSIKCEEDEVTELKIMGEKSLKPPWFNGFAVPNQTLSMNFSIDSFLTTLTRLTSLRVLSLVSLGIWGPLPDTIHSFPLLQVLDLSSNFLFGAIPHKISTMVKLHSLTLDDNYFNTTMPDSFDSLSNLNILSVKNNGLKGSFPSSLGKMKTLEVISLSHNELSGGLPGLSSLTGLHVLDLRDNYLESELPLFPKSVVTVLLSNNSFSGEIPKQFDELGQLQHLDLSSNHLSKTPPSTLFSLPKISYLNLASNMLTGALPDKLNCGSKLGFVDISRNKLSGGLPSCLANTSDSRVVRYAGNCLSVDSLNQNRGSYCKESASGWKSFKTWEVAVVMAIIVVLVLVLLVSGFFVWKKYRSRKTTGQDVLLKIVQDNSSTGVPSEILANARFISQTVKLGTQTTPTCRQFSIEELKEATKNFDLSNYIGQGSIGKLYKGKLENGSYVAIRSLVLSKKCSIQNLRAKLDLLSKLQHPNLVSLLGHCVDGGGQDDSNSHKLHLVYEYVPNGNYHTHLSEFSVEKALQWSDRLAILIGVAKAVHFLHTGVIPGCFSNLLKTKNILLDEHRIPKLSDYGMSIITEEIEKFEVCPGNPMLRLRTKADDDVYNFGFILFESLVGPIACDKGETFFLNEKASFGSEDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATTDADQKSD 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00519 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 443 563 - -
Spst4g00519 762 ProSiteProfiles Protein kinase domain profile. 480 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00519 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 564 762 - -
Spst4g00519 762 Pfam Protein tyrosine and serine/threonine kinase 482 742 IPR001245 GO:0004672|GO:0006468
Spst4g00519 762 Gene3D Ribonuclease Inhibitor 258 371 IPR032675 -
Spst4g00519 762 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Spst4g00519 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 25 256 - -
Spst4g00519 762 Gene3D Ribonuclease Inhibitor 25 257 IPR032675 -
Spst4g00519 762 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 258 382 - -
Spst4g00519 762 Gene3D Transferase(Phosphotransferase) domain 1 564 762 - -
Spst4g00519 762 ProSiteProfiles Leucine-rich repeat profile. 281 302 IPR001611 GO:0005515
Spst4g00519 762 Gene3D Phosphorylase Kinase; domain 1 442 563 - -
Spst4g00519 762 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Spst4g00519 762 Pfam Leucine rich repeat 259 316 IPR001611 GO:0005515
Spst4g00519 762 SMART LRR_typ_2 279 302 IPR003591 -
Spst4g00519 762 SMART LRR_typ_2 234 256 IPR003591 -
Spst4g00519 762 SMART LRR_typ_2 163 186 IPR003591 -
Spst4g00519 762 SMART LRR_typ_2 303 327 IPR003591 -
Spst4g00519 762 SUPERFAMILY Protein kinase-like (PK-like) 460 745 IPR011009 -
Spst4g00519 762 SUPERFAMILY L domain-like 83 364 - -
Spst4g00519 762 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 329 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00519 Spst-Chr4 8056506 8062096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00519 1 690 Miscellaneous Gene Families AT5G14210 55.857 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Spst4g00519 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00519 - - gmx:100799183 1290.02