Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00514 GGATACGGTTTAACTGAGTCGTGTGCCGGGGTTGCCCGAACCTCGCCAGAAGAGGATAAGCGAGTGGAAACAACAGGTAAACTGATATCAGGGGTGGAAGCCAAAATTGTGAACCCAAACACAGGAGAAGCCATGTTTCCTGGTGAACAAGGAGAACTCTGGCTCAAATCACCTTCTATTATGCAAGGTTACGTTGATGACCCAGAAGCAACTGCAGCAACTTTGGTGAACGGGTGGTTAAGGACAGGGGACCTTTGTTATTTCGATAACGACGGTTTCTTGTATGTTGTGGACAGATTGAAAGAGTTGATCAAATACAAGGGCTACCAGGTTGCTCCTGCAGAGCTAGAAAAAAGGCTCCTGTCTCACCCAGAGATAAATGATGCTGCAGTTATTCCATACCCTGATGAAGAAGCCGGGCAGGTGCCCATGGCGATTGTCGTAAGAAAACCACAAAGTTGGCTTAGTGAAGCAGAAATAATTGATTTTGTCGCCAAACAGGTTGCACCGTACAAGAAAATAAGGCGCGTAGCATTTGTGGAATCAATACCCAAGAATGCCTTGGGAAAGATACTGAGGAAGGACTTGAATAGGCTTGTTCTCTCTAGGTTATAA 615 0.4585 GYGLTESCAGVARTSPEEDKRVETTGKLISGVEAKIVNPNTGEAMFPGEQGELWLKSPSIMQGYVDDPEATAATLVNGWLRTGDLCYFDNDGFLYVVDRLKELIKYKGYQVAPAELEKRLLSHPEINDAAVIPYPDEEAGQVPMAIVVRKPQSWLSEAEIIDFVAKQVAPYKKIRRVAFVESIPKNALGKILRKDLNRLVLSRL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00514 204 Gene3D - 1 104 IPR042099 -
Spst4g00514 204 Pfam AMP-binding enzyme 1 106 IPR000873 -
Spst4g00514 204 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 197 - -
Spst4g00514 204 SUPERFAMILY Acetyl-CoA synthetase-like 1 201 - -
Spst4g00514 204 FunFam 4-coumarate--CoA ligase 2 102 203 - -
Spst4g00514 204 Pfam AMP-binding enzyme C-terminal domain 115 190 IPR025110 -
Spst4g00514 204 Gene3D - 105 202 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00514 Spst-Chr4 7963380 7968628 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00514 1 204 Monolignol Biosynthesis Gene Families AT1G20500 65.049 7.15e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00514 K01904 - gmx:100801143 362.073