Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00485 ATGAAGAGTGATTTGGATTTTGGTCTTGAAATAGCTAGTTGTGATGAGAGGAAACGGCTTTTTTGCATCTGGTTGTGTGGTTTTCAATCATTATCATCTTTGAAGTTGTTTGAGTTTGAAACTTTTGTACTTGAGGGGCTGAGCAATGGAACCTCCGATAGGATTTTGGGCTTCATTATGGAACTTTGTTTGCTTTCTGCCTTTCTTCATCGGTCTTTGGCTTCTTGGCAACATCAAAGGTTTCATTTTCTGCCCATTGATATGCTTAATGATGACAATTGGCAACTCAGCTGTCATATATGGTCTTTGGCCCATACATTATCTGAAACATTAGGACCTGCACTGAAGTTTGTTGCATGCACATGTCTACTACCCTTGGTGTTGATTTTATGGCCATTGATTGGCATTGTTGGAAGTGTTATAGGCGGAGCAGCCTATGGATTTCTAGCACCAATATTTGCTACTTTTGAGGCGGATGGAACATGGACCACTATTACAAAGACCATTGATATTGTCAAGGATGTGAAAAATGAATGCTATTATACTTATTTATCGGTTATGGATGACCTGCTACAACAGAAGGATCCACCTGGCAAATACTATGAAATCAGGCTGCAATATCTTCCTGGAGCTTTTGTGGTTGCGGTTCTCGGGATCATAGTTGACACGCCAGTTATATCTACTGTTGCTATATGTAAAGGCCCTTACATGCTTTTCAAAGGATGGAATCGTCTGTTTCATGATCTTATAGGTCGTGAAGGCCCTTTCTTGGAGACAATATGTGTGCCCTTTGCAGGCCTTGCTATCATTCTGTGGCCACTGGCTGTTGTTGGGGCGGTTCTGGCATCTGTGTTAGCTAGTTTCTTTCTCGGTGCCTATGCAGGTCTTATTACTTATCAGGAGTCTTCTTTCTTGTTTGGCCTTAGGTACATCGTTGCAGTTGTGTCCCTTTATGATGAATACAGCAATGATATTCTTGACATGAGAGATGGATCCTGCTTCCCAAGGCCACACTATCGAGAAACGACTCAATTGAAACCATTATCAAGGACCCCTTCCCGTTCAAATTCCCTCACAAAAACAAAGTCCTTAACGAAGACACTCTCTCATGCCTTGTCACTGAAAAATAATGTACCCGAGTTCAAACCATTTGAGCTGTTGGATGGCTTATTCAAGGAATGTCATCATCTTGGAGAATCACTGATTTCTGAAGGGCTAATAACACATGAAGACATTCTAGAAGCAAAGTATGGTAAAGGGGGTAAAGTCATTAGAATTGGCTTGCCAGCTTATTGCCTTCTCCAAGCACTACTTCGTTCTGTAAAATACAATTCTTCTGGTATATTGATAAGTGAGGATACTGAACTAACTACCTCAAACAAACCGAAGGAACAATTTTTTGAATGGTTCCTTAATCCCCTTTTGGTCATTAAAGAACAAATCAAAGTTGAAGATCTTAGTGTGTCAGAAGAGGACTACTTCGGCAAATTAGTCCTCTTCAATGGTGATCCCAACAGGGTAAGAAAATCATTTATTGGCCTCAGAGCCCCAGAATCTGACCGCAAAAGTGCTGAACTTGATGCATTGGCAAGAAGGCTTCAGGGGATCACCAAATTCATCACAAGATTCCCTACCTACAAGAGGCGTTTTGATGTTATCTTAAATACACTATCTGATGAGCTTGCTGAGAAGCATGGTGCTTCCAAAATAATCAGATCAAAAAGTGCTTTTCCTCGGATACTAAGTTTAAAATCCTTCACTTGCCAAACATCTAAATCTAATGATTCTGCTTTCAATGAGTTCCAAGTAGGTGACTCAATAGGGTGGGTTGTCCCACCCCACAATGACACCAACTTCTACAATGAATGGGCTTCCCGCAACAGGTTCCTCGCTGGTGACACCATCTGGTTTAAGTACAAGAAGGACTCAGTGATGGAGGTGGGTGAAGTGGATTACACACACTGCAATGCCACACACCCCACACGCTTCTCCAACAGTGGCAACACTCAATTCAAGCTTGTTCACTCAGGGACCTTCTACTTCATCAGTGGTGCTTCAGGGCACTGTGAGATGGGACAGAAGATGATTGTGAGGGTCATGGAGGATGAATCTCATCCTCAGCATGCCAAGTCTTCTGGTTACCAAGTTCCAGTTTCGCCAATTGGGGTGTCTCAAATGCTTTTCCTCAGTTTCTTTTGGCCTGTGTTGCGTCTTATGTAG 2220 0.4221 MKSDLDFGLEIASCDERKRLFCIWLCGFQSLSSLKLFEFETFVLEGLSNGTSDRILGFIMELCLLSAFLHRSLASWQHQRFHFLPIDMLNDDNWQLSCHIWSLAHTLSETLGPALKFVACTCLLPLVLILWPLIGIVGSVIGGAAYGFLAPIFATFEADGTWTTITKTIDIVKDVKNECYYTYLSVMDDLLQQKDPPGKYYEIRLQYLPGAFVVAVLGIIVDTPVISTVAICKGPYMLFKGWNRLFHDLIGREGPFLETICVPFAGLAIILWPLAVVGAVLASVLASFFLGAYAGLITYQESSFLFGLRYIVAVVSLYDEYSNDILDMRDGSCFPRPHYRETTQLKPLSRTPSRSNSLTKTKSLTKTLSHALSLKNNVPEFKPFELLDGLFKECHHLGESLISEGLITHEDILEAKYGKGGKVIRIGLPAYCLLQALLRSVKYNSSGILISEDTELTTSNKPKEQFFEWFLNPLLVIKEQIKVEDLSVSEEDYFGKLVLFNGDPNRVRKSFIGLRAPESDRKSAELDALARRLQGITKFITRFPTYKRRFDVILNTLSDELAEKHGASKIIRSKSAFPRILSLKSFTCQTSKSNDSAFNEFQVGDSIGWVVPPHNDTNFYNEWASRNRFLAGDTIWFKYKKDSVMEVGEVDYTHCNATHPTRFSNSGNTQFKLVHSGTFYFISGASGHCEMGQKMIVRVMEDESHPQHAKSSGYQVPVSPIGVSQMLFLSFFWPVLRLM 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00485 739 Gene3D - 598 705 IPR008972 -
Spst4g00485 739 SUPERFAMILY Cupredoxins 600 700 IPR008972 -
Spst4g00485 739 CDD OsENODL1_like 600 700 IPR041846 -
Spst4g00485 739 ProSiteProfiles Phytocyanin domain profile. 599 701 IPR003245 GO:0009055
Spst4g00485 739 Pfam Plastocyanin-like domain 618 693 IPR003245 GO:0009055
Spst4g00485 739 PANTHER MEMBRANE PROTEIN 108 595 IPR040229 -
Spst4g00485 739 FunFam Early nodulin-like protein 1 598 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00485 Spst-Chr4 6898597 6905582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00485 600 703 Phytocyanin Superfamily AT1G48940 56.190 1.16e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00485 - - gmx:100815201 765.377