Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00417 ATGGTGATGGTAATTCTGACAACCCTTTTGGTTATCTTTGTGAGTCTGGTATTGAAGGTAGGGTATGAGACGATTTCATGTTACTGGGTCACTCCAATGCGCATAAGGAAGATGATGGAGAAACAAGGTGTGCATGGTCCTAAACCTAGATTTCTTCTTGGCAACATCATGGACATGACTTCCCTTGTTTCAAGAGCAGTTTCTCAGGACATGGAAACCATCAGCCATGATATTGTTGGTCGTATTTTGCCCCATTTTGTTGCGTGGTCCAATCAATATGGAAAGAGATTCATATATTGGAATGGAATAGAACCAAGGTTGTGTTTAACAGACACTGCATTGATTAAGGAATTTCTGTCAAAGTACAACTCCTTATCTGGAAAATCATGGCAACAACAGCAAGGCTCCAAACATTTCATTGGGAAAGGTTTGTTGATGGCAAATGGTGAACATTGGCACCACCAACGTCACATGGTTGCCCCTGCATTCATGGGAGAGAGACTTAAGGGCTATGCTGGGCACATGGTGGAGTGCACAAAGGATATGATTCAGTCACTGAAAAATGCATTAGAAGGTGGGGAAAGTGAGGTGGAGATTGGAGAGTACTTAACTGAACTCACAGCAGATATTATCTCAAGAACAGAGTTTGACACAAGCTACAAAAAGGGGAAGCAAATATTCCATCTCCTCACACAACTTCAGACTCGTTGTGCTCAAGCAACTCGCCATCTTTTCCTTCCTGGAAGCAGGTTTTTCCCCAGCAAGTACAATAGAGAGATAAAGAGTATGAAGAGGGAGGTGGAGAGCCTCTTGATGGAGATCATAGAGGGGAGGAAAGACTGTGTGGAGATGGGGAGAAGCAATTCTTATGGGAATGATTTGTTGGGCATACTCTTGGATGAGATGAAGAAAGAGGGTGGAAGCTTGAATCTTCAACTGGTTATGGATGAATGCAAAACCTTTTTCTTTGCAGGACATGAAACCACTGCACTCTTACTCACTTGGACAGTGATGTTGCTAGCAAGCAATCCACATTGGCAAGACAAAGTCAGAGCTGAAGTCAAAGAGGTCTTCCAAGGGGAAACTCCATCTGTTCATCAACTCTCCAAGCTCACTCTGTTAAACATGGTGATTAAAGAGTCCATGAGGCTGTATCCTCCTGCAACAGTGCTTCCAAGAATGGTGTTCAAAGACATGGTGTTGGGAGACCTCCACATTCCCAAAGGCTTATCAATTTGGATTCCAGTGTTGGCCATTCACCACAGTGAAGAACTGTGGGGTGAAGATGCAAATGAGTTCAACCCTGAGAGGTTTGCCTCAAAATCATTCATGCCAGGTCGTTTCATACCCTTTGCTTCTGGTCCTAGAAACTGTGTTGGACAATCATTTGCCATGATGGAAGCCAAGATCATCCTGGCCATGTTCATCTCTCAGTTTAGCTTCACCATTTCTGAGACCTACAGGCATGCACCAGTGCTTGTCCTCACAATCAAACCCAAATATGGTCTTCAAGTTTGTTTAAAGCCTTTAAATCCATGA 1539 0.4353 MVMVILTTLLVIFVSLVLKVGYETISCYWVTPMRIRKMMEKQGVHGPKPRFLLGNIMDMTSLVSRAVSQDMETISHDIVGRILPHFVAWSNQYGKRFIYWNGIEPRLCLTDTALIKEFLSKYNSLSGKSWQQQQGSKHFIGKGLLMANGEHWHHQRHMVAPAFMGERLKGYAGHMVECTKDMIQSLKNALEGGESEVEIGEYLTELTADIISRTEFDTSYKKGKQIFHLLTQLQTRCAQATRHLFLPGSRFFPSKYNREIKSMKREVESLLMEIIEGRKDCVEMGRSNSYGNDLLGILLDEMKKEGGSLNLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPHWQDKVRAEVKEVFQGETPSVHQLSKLTLLNMVIKESMRLYPPATVLPRMVFKDMVLGDLHIPKGLSIWIPVLAIHHSEELWGEDANEFNPERFASKSFMPGRFIPFASGPRNCVGQSFAMMEAKIILAMFISQFSFTISETYRHAPVLVLTIKPKYGLQVCLKPLNP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00417 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 502 - -
Spst4g00417 512 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 Pfam Cytochrome P450 86 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 Gene3D Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00417 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00417 Spst-Chr4 5201777 5207399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00417 1 372 Cytochrome P450 AT5G38450 66.313 1.48e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00417 K10717 - gmx:100812567 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00417 4 5201777 5207399 Spst1g01711 1 21142952 21146300 PCT