Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00338 ATGCAAACCAGGGAAGTCTCAGCCCTCAATTATTTACTCCCTTCAAACCCTTGTCCCTACCCTCCTAACAACTTCAACATGATCCAAAACAACATTCCCACATTTCAGTTCCAAAGATTCTCTAACCAATTATATGGCCACAGCCACAACACTCCCTATGATTTCAGTCCTCAATCGTCATGCATCAGCAGCAACTCCACTTCTGATGAGGCAGATGAGCAACAACTGAGTCTCATCAACGAGAGGAAGCACAGGAGGATGATATCAAACCGAGAATCAGCACGGAGGTCACGGATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCACAAGTGGTGTGGCTCAGAAACGAGAACCACCAACTCATAGACAAGCTGAACCATGTCTCAGAGAGCCATGACCAAGTGCTCCAAGAGAATGCTCAGCTGAAAGAGGAAGCCTCAGAACTTCGCCAAATGATTAGGGACATGCAGATACACAGCCCTTGCCCCTCCTTCACCCCTTTCGAAGATGATGTCCCTTGCAGCTCAGCATATCTCAGATCCGATTCTTCAAACCAATCCAACTCATGTAACAACATGGACCTCCTTGGCTGA 597 0.474 MQTREVSALNYLLPSNPCPYPPNNFNMIQNNIPTFQFQRFSNQLYGHSHNTPYDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDQVLQENAQLKEEASELRQMIRDMQIHSPCPSFTPFEDDVPCSSAYLRSDSSNQSNSCNNMDLLG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00338 198 Coils Coil 126 160 - -
Spst4g00338 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Spst4g00338 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Spst4g00338 198 Gene3D - 80 135 - -
Spst4g00338 198 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Spst4g00338 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 164 IPR044521 -
Spst4g00338 198 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Spst4g00338 198 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Spst4g00338 198 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Spst4g00338 198 MobiDBLite consensus disorder prediction 179 198 - -
Spst4g00338 198 FunFam BZIP transcription factor 80 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00338 Spst-Chr4 3962328 3962924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00338 44 173 bZIP Transcription Factor Family AT3G30530 69.925 7.29e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst4g00338 bZIP_1 2.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00338 - - aprc:113867865 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00338 4 3962328 3962924 Spst1g01500 1 18720350 18720937 PCT