Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00319 ATGGCAGGGGCAGAAGCACAAGGTACTATTGGTCAAACTGCACTTATGGAAAACGTTCTGGAACGATATGAGAGACATGCCCATATAGGGCAACTTGTTGAAGATGGTGATGAATCACAGGGCAACTGGTCCTTGCAATGCTTCAAGCTCACCGGAAAAGTTGAAGTCTTAGAGAGAAACTTAAGGAACTTTGTGGGACAAGATCTGGATCCCTTGAACTTGAGAGAGCTTCAGAGTTTGGAGCACCAGCTTGACACAGCTATAAAGCGCATCCGAACTAGAAAGAACCAAGTTATGAATGAATCCATCTCAGATCTGCAGAAAAAGATTAAGGAGAAAGGGAAGTCAGTGGCTGAACGTCCACAATGTGTGCCTGAAACCTTAGGTCCAACATACCCTCCAGAGCTTCAACCACAACAAAGACTAGTTCCTTCTTTAACACTCGGTGAGAATTTACAAGCAGCACCATTGGAGGAAGTGGATGAAGAACGAGCAGTTCCTAGTACCACTACTCTCATCCCACCATGGATGCTGCATCATTTTACAAGATAA 552 0.4457 MAGAEAQGTIGQTALMENVLERYERHAHIGQLVEDGDESQGNWSLQCFKLTGKVEVLERNLRNFVGQDLDPLNLRELQSLEHQLDTAIKRIRTRKNQVMNESISDLQKKIKEKGKSVAERPQCVPETLGPTYPPELQPQQRLVPSLTLGENLQAAPLEEVDEERAVPSTTTLIPPWMLHHFTR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00319 183 Coils Coil 77 97 - -
Spst4g00319 183 ProSiteProfiles K-box domain profile. 40 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst4g00319 183 Pfam K-box region 37 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst4g00319 183 MobiDBLite consensus disorder prediction 114 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00319 Spst-Chr4 3693269 3698900 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00319 16 178 MADS-box Gene Family AT5G60910 42.935 1.94e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00319 K09264 - gmx:100787971 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01469 1 18381993 18389649 Spst4g00319 4 3693269 3698900 PCT