Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00308 ATGGCTGTATTCATGGCAATTGTAGGTGTAGTGCTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAGGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCAGTTTTTGGGGAGACAACTGAGTTTCTCAAGCAGGGTCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCTCACATACTTGGTTGTCCTACCATTGTGTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAGGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTGGATATCTTAGGCAAATGTAACATTGCAGCTGTTCATGGCTCCACACACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAGCCCACCTTAGCAACTGGGATAACAAAGTCATCAACATTCAAGAGAAAACCAAGGAGATGGCCTTCCTCTCATCTCTGAAGCAGATTGCTGGCAAAGAATCTGTCTCATTATCTGAATCATTCATGACAGAGTTCTTCAAGCTTGTTCTGGGAACCATTTCTCTCCCTATTAACCTTCCTGGGACAAATTACCACCGGGGATTCCAGGCAAGGAAGACTATGGTCAACGTTTTGAGTAAGCTACTAGAGGAAAGAAGAGCATCCAATGAAACCTACCATGACATGCTTGGTGGCTTGATGGCAAGAGATGAAAATAGATACAAACTAAGTGATGAAGAAATCATTGATCTGGTCATAACGGTGATATATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAACTGAGAAAAGAGCATTTGGCCCTAAGAGAGAGGAAAAAGCAAGATGAGCCAATTGATAGCAATGACCTCAAGTCAATGAGTTTTACTCGAGCGGTGATTTTTGAGACCTCTAGATTGGCCACAATAGTTAATGGGGTCCTAAGGAAAACCACTGAAGACATGGAACTAAACGGCTATTTGATTCCCAAAGGATGGAGAATATATGTTTACACAAGAGAGATCAACTATGACCCTTTTCTTTATCCTGATCCTCTCACTTTCAACCCATGGAGATGGCTGGATAAGAGTCTAGAATCAAAAAACTATTTCTTGATATTTGGAGGAGGCACCAGACTTTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTTACCAGATACAGGTGGGAAGAAGTGGGAGGGGATAAACTAATGAAATTTCCTAGAGTTCAGGCACCTAATGGACTGCACATAAGAGTGACATCTTACTAA 1392 0.4203 MAVFMAIVGVVLVLCFCSALLRWNEVRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRAHLSNWDNKVINIQEKTKEMAFLSSLKQIAGKESVSLSESFMTEFFKLVLGTISLPINLPGTNYHRGFQARKTMVNVLSKLLEERRASNETYHDMLGGLMARDENRYKLSDEEIIDLVITVIYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLALRERKKQDEPIDSNDLKSMSFTRAVIFETSRLATIVNGVLRKTTEDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWLDKSLESKNYFLIFGGGTRLCPGKELGITEISTFLHYFVTRYRWEEVGGDKLMKFPRVQAPNGLHIRVTSY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00308 463 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 SUPERFAMILY Cytochrome P450 27 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 CDD CYP90-like 60 461 - -
Spst4g00308 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Spst4g00308 463 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PANTHER CYTOCHROME P450 26 30 441 - -
Spst4g00308 463 FunFam Cytochrome P450 85A1 24 462 - -
Spst4g00308 463 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00308 463 Pfam Cytochrome P450 34 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00308 Spst-Chr4 3584604 3588132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00308 81 463 Cytochrome P450 AT5G38970 71.094 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00308 K09590 - gmx:100805958 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00308 4 3584604 3588132 Spst1g01461 1 18262611 18266192 PCT