Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00303 ATGGCTTCTTCCGATATTAATTGGGACAGGCTAGATAAAACGAAATTCTATGTGGTGGGAGCAGGACTATTTACAGGTGTTACGGTAGCACTATATCCAGTTTCTGTTGTGAAGACTAGGCTGCAGGTTGCTTCAAACGATACTTTGGAGAGAAGTGCATTATCGGTTGTGAAAGGATTACTTAAAACGGATGGCATCCGAGGTTTGTATAAAGGGTTTGTTACCGTTATCACTGGTACAATTCCTACCAGAATCATATTTCTCACTGCCTTGGAGACGACAAAGATGGCTTCCCTCAGGATGCTGGAGCCATTTAGACTATCTGAAACTTCTCAAGCTGCCATATCAAATGGAGTTGCAGGCATGACATCTTCGCTTTTGGCACAAGCTGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATATTCAGGCCATACCCAATATAGGGGGGGTTTAGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATTAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGTACCATCTAGTGCTGTCTGGTGGGCAAGTTATGGTTCAAGCAAAAATTACTTATGGAGATTCTTTGGGGATAAGTCCAGTGAGGAAGGTACTCCTAGTCTACCAAAGATTATATTAGTTCAGGGTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGCATTACAACGCCATTGGATACTATCAAGACACGGTTACAGGTGACTGGACTTGAAAAGAGAATCTCTGTAAAACAAGTTGTTAAAGATTTGATTATTGAAGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCGTGGGGTACTTCAATGATTCTGGCTTATGAATATCTGAAGCGCGTATGTGCAAAAGATGAACAGGTGTAA 936 0.4177 MASSDINWDRLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASNDTLERSALSVVKGLLKTDGIRGLYKGFVTVITGTIPTRIIFLTALETTKMASLRMLEPFRLSETSQAAISNGVAGMTSSLLAQAVFVPIDVVSQKLMVQGYSGHTQYRGGLDVARKVLRSDGIRGLYRGFGLSVMTYVPSSAVWWASYGSSKNYLWRFFGDKSSEEGTPSLPKIILVQGTGGIIAGATASCITTPLDTIKTRLQVTGLEKRISVKQVVKDLIIEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRVCAKDEQV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00303 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Spst4g00303 311 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 309 - -
Spst4g00303 311 Gene3D Mitochondrial carrier domain 15 311 IPR023395 -
Spst4g00303 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 304 IPR018108 -
Spst4g00303 311 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
Spst4g00303 311 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Spst4g00303 311 Pfam Mitochondrial carrier protein 226 308 IPR018108 -
Spst4g00303 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Spst4g00303 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Spst4g00303 311 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Spst4g00303 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Spst4g00303 311 SUPERFAMILY Mitochondrial carrier 9 301 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00303 Spst-Chr4 3506630 3511476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00303 6 309 Chloroplast and Mitochondria Gene Families AT5G15640 72.313 6.04e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00303 K15121 - gmx:100819519 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00303 4 3506630 3511476 Spst1g01455 1 18214268 18218597 PCT