Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00301 ATGCACGCAAACCATGCAGTACGGACGTCCGAATCTCAACGACCCGACTTGGCCATTTCCCATGATAAAGCATCTCTGTTGGCAATTCAAGTCAATATGTTCCCAAACGCTGGCTTTTGCATTGGAATAAACGCACACCATGCAGCTTTTGACGGAAAATCTGCAACCATGTTCATGAAATCATGGGTCTCAATATGCTCTAACCTTCAAAACCCTACTACACCTACACCAACACCAACACCAATACCATCCTTACCTCACCATCTTGCACCTTTCTATGACAGATCATTGATAAAAGAACCTACTGGAAATGCTGAAGTGTATGTTGACACGTGGATGAATCATAATGGTTCGACTAACCGAAGTCTTAAGCCGTGGGATGTTGTTACTGCAAAGCTGAGTGATGAACTCAAAGGTTTGTTTGAATTGACCCCCTCACAGATTCTAAAGCTCAAACAACATGCAAACTCTAAGGTGAAAGTGAATGTTCATCCGTCAACATTTTCTGTTACGTGTGCTCATGTGTTGGCGTGTTTGGTCAAAGTGAAACAAGTGAAAAAAGATAACGTGGGTTTCATATTTTACATTGACTGTAGATCGCGCTTGGACCCTCCAACTCCCGCCACGTATGTTGGAAACTGCGTTGCAAAACAAATGGTTGTGGCGTTGACTAAGGAGTTAATTGGAAATGATGGGTTCATTTGTGCTTTGGAGGGGATAAGTGAGGCTTTGAATGGAATGAAGGATGAAGGAGTGTTGAATGAAGCAGAAAGATGGGTTTCGGATGTGAATGAACTTATGGAGGGTACAATGTCTATTACTGGATCTCCCAGACATGGGCAACATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGACTTTAATAGACGAAACAGGAACAATTACTCTTAATGAAAGTAGAGATATCAGTGGAGGAATCGAGATTGGATTGGTGTTAAGTAAACGTGAGATGCAAGATTTTACTACCCTTTTTGTTCAAGGACTTGATTCTCTTTAG 1020 0.4206 MHANHAVRTSESQRPDLAISHDKASLLAIQVNMFPNAGFCIGINAHHAAFDGKSATMFMKSWVSICSNLQNPTTPTPTPTPIPSLPHHLAPFYDRSLIKEPTGNAEVYVDTWMNHNGSTNRSLKPWDVVTAKLSDELKGLFELTPSQILKLKQHANSKVKVNVHPSTFSVTCAHVLACLVKVKQVKKDNVGFIFYIDCRSRLDPPTPATYVGNCVAKQMVVALTKELIGNDGFICALEGISEALNGMKDEGVLNEAERWVSDVNELMEGTMSITGSPRHGQHFGWGRPKKVDMTLIDETGTITLNESRDISGGIEIGLVLSKREMQDFTTLFVQGLDSL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00301 339 Gene3D - 3 124 IPR023213 -
Spst4g00301 339 PANTHER - 4 338 - -
Spst4g00301 339 Gene3D - 134 339 IPR023213 -
Spst4g00301 339 SUPERFAMILY CoA-dependent acyltransferases 166 252 - -
Spst4g00301 339 Pfam Transferase family 15 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00301 Spst-Chr4 3464502 3465521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00301 26 334 Monolignol Biosynthesis Gene Families AT5G48930 25.382 5.54e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00301 - - gmx:100800849 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00301 4 3464502 3465521 Spst1g01454 1 18210871 18212304 PCT