Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00299 ATGGCTGAACAAGCATCACCATCACCTTTCAAAGTTATCCAAGTTTGTTCAGTGGCACCACTTCATGAACCAACCATTTCCACCATTGTTCCATCCTCTCTTCCACTAACCTTCTTTGACCTCTTATGGCTGCGCTTTCCACCCGTAAAATGTCTCTACTTCTATCCCTTTCCCCACCCAATCTCTTCATTTCTCCATTCTCTTGTTCCTTCTCTCAAACATTCTCTTTCTCTCACTCTCCAACAATTTCTTCCTTTTGCTGGCACCCTCACATGGCCCTCTCACTCTCCCAAACCCATCATCAACTATCTACCGGGAGACACTGTTTCCTTCATTGTTGCTGAATCCAACCAAAACTTCAATCATCTTTGCTCCCATCTCTGTGAAGCATCACAACGACACGGTTTGGGACCCGACTTGGCCATTTCCCATGATAAAGCATCTCTGTTGGCAGTTCAAGTCACTGTGTTCCCAAACGCTGGCTTTTGCATTGGAATAAACACACACCATGCAGCTTTTGACGGAAAATCTGCAACCATGTTCATGAAATCATGGGCCTCTGTATGCTCTAATCTTCAAAACCCTAATACACCTACACCAACACCAACACCATCCTTACCTCAGCATCTTACACCTTTCTTTGACAAATCATTCATAATAGAACCTTCTGGAATTGCTGAAGTGTATGTTGACACGTGGATGAATAACAATGACCGAAGTTTCAATGTTGTTACTCCAAAGCCGAGTGATGGACTCAAAGGTTTGTTTGAATTGACCCCCTCACAGATTCTAAAGCTCAAACAACATGCAAAGTCTAAGGTGAAAATGAATGTTCATCCGTCAACATTTTCTGTTACGTGTGCTTATGTGTTGGCGTGTTTGGTCAAAGTGAGACAAGTGAAGGAAGATACCGTGGGTTTCATATTTTATATTGACTGTAGATCACGCTTGGACCCTCCAATTCCCGCCACGTATTTTGGAAACTGCGTTGCAAAACAAATGGTTGTGGCTTTGACTAAGGAGTTGGTTGGAAATGATGGATTCATTTGTGCTGTGGAGGGGATAAGTGAGGCTCTGAATAGAGTGAAGGATGAAGGAGTGTTGAATGGAGCAGAAAGATGGGTTTCGGATATGAATGAATTTATGGAGGGTAGAATATCTATTGTTGGATCTCCTAGGTTTGAGGTTTACAGTATTGATTTTGGGTGTGGAAGGCCAAAGAAGGTGGATATCAGTTCAATAGACGAAGAAGAAGCATTTTCTCTTAATGAAAGTAGAGATATCCATGGAGGAGTTGAGATTGGATTGACGTTAAGTAAAGCTGAGATGGAAGAATTTACTACCCTTTTTATTAAAGGACTTGATTCTCTTTAG 1374 0.4199 MAEQASPSPFKVIQVCSVAPLHEPTISTIVPSSLPLTFFDLLWLRFPPVKCLYFYPFPHPISSFLHSLVPSLKHSLSLTLQQFLPFAGTLTWPSHSPKPIINYLPGDTVSFIVAESNQNFNHLCSHLCEASQRHGLGPDLAISHDKASLLAVQVTVFPNAGFCIGINTHHAAFDGKSATMFMKSWASVCSNLQNPNTPTPTPTPSLPQHLTPFFDKSFIIEPSGIAEVYVDTWMNNNDRSFNVVTPKPSDGLKGLFELTPSQILKLKQHAKSKVKMNVHPSTFSVTCAYVLACLVKVRQVKEDTVGFIFYIDCRSRLDPPIPATYFGNCVAKQMVVALTKELVGNDGFICAVEGISEALNRVKDEGVLNGAERWVSDMNEFMEGRISIVGSPRFEVYSIDFGCGRPKKVDISSIDEEEAFSLNESRDIHGGVEIGLTLSKAEMEEFTTLFIKGLDSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00299 457 PANTHER - 11 456 - -
Spst4g00299 457 Pfam Transferase family 32 447 - -
Spst4g00299 457 SUPERFAMILY CoA-dependent acyltransferases 281 454 - -
Spst4g00299 457 Gene3D - 248 457 IPR023213 -
Spst4g00299 457 Gene3D - 10 244 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00299 Spst-Chr4 3426621 3427994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00299 40 452 Monolignol Biosynthesis Gene Families AT5G48930 25.349 6.60e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00299 - - gmx:100800849 610.912