Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00297 ATGAATCAACCATCCACCATTGTTCCAACCTCTCTTCCATTAACCTTCTTTGACCTCTTATGGCTGCGCCTTCCACCCGTAAAATGTCTCTACTTCTATCCCTTCCCCCACCCAATCTCTTCATTCCTTCACCCTCTTCTTCCCTCTCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTTCTTCCTTTTGCTGGCACCCTCACATGGCCCTCTCACTCTCCCAAACCCATCATCAACTATCTACCCGGCGACACTGTTTCCTTCACTGTTGCTGAATCCAACCAAAACTTCAACCATCTTTCCTCCCATCTCTGTGAAGCATCACAACGACACGGTTTGGGACCCGACTTGGCCATTTCCCATGATAAAGCATCTCTGTTGGCAGTTCAAGTCACTGTGTTCCCAAACGCTGGCTTTTGCATTGGAATAAACGCACACCATGCAGCTTTTGACGGAAAAACTATAACAATGTTCATGAGATCATGGGCCTATATGTGCTCTAACCTTCAAAACCCTAATACACCTACACCAACACCATCCTTACCTCCACATCTTACACCTTTCTTTGACAGATCATTGATAAGCGAACCTTCTGGAATCTCTGAAGTGTATACTGACACGTGGATGAATCATAATGGTTCGACTAACCGAAGTCTCAAGCCGTGGGAGTTTGTTTGTGAAAAGCCGAGTGATGGACTCAAAGGTTTGTTTGAATTGACCCCCTCACAGATTCTAAAGCTCAAACAACATGCAAACTCTAAGGTGACAGTGAATGTTCACCCGTCAACATTTTCTGTTACGTGTGCTTATGTGTTGGCGTGTTTGATCAAAGTGAGACAAGTGAAAAAAGATACCGTGGATTTCATATTTTATATTGACTGTAGATCGCGCTTGGACCCTCCAATTCCCGCCACGTATTTTGGAAACTGCGTTGCAAAACAAATGGTTGTGGCTTTGACTAAGGAGTTGGTTGGAAATGATGGATTCATTTGTGCTTTGGAGGGGATAAGTGAGGCTTTGAATAGAGTGAAGGATGAAGGAGTGTTGAATGGAGCAGAAAGATGGGTTTCGGATATGAATGAGCTTCTGGAGGGTAGAATATCAACTGCTGGATCTCCCAGGTTTGAGTTTTATGATATTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGGCTTTAATAGACGAAACGGGAACAATTTCTCTTAATGAAAGCAGAGATATCAGAGGAGGAATTGAGATTGGATTGGTGTTAAATAAACGTGAGATGAAGATTTTATACTACCCTTTTTATTCAAGAACTTGA 1311 0.4325 MNQPSTIVPTSLPLTFFDLLWLRLPPVKCLYFYPFPHPISSFLHPLLPSLKHSLSLTLQHFLPFAGTLTWPSHSPKPIINYLPGDTVSFTVAESNQNFNHLSSHLCEASQRHGLGPDLAISHDKASLLAVQVTVFPNAGFCIGINAHHAAFDGKTITMFMRSWAYMCSNLQNPNTPTPTPSLPPHLTPFFDRSLISEPSGISEVYTDTWMNHNGSTNRSLKPWEFVCEKPSDGLKGLFELTPSQILKLKQHANSKVTVNVHPSTFSVTCAYVLACLIKVRQVKKDTVDFIFYIDCRSRLDPPIPATYFGNCVAKQMVVALTKELVGNDGFICALEGISEALNRVKDEGVLNGAERWVSDMNELLEGRISTAGSPRFEFYDIDFGWGRPKKVDMALIDETGTISLNESRDIRGGIEIGLVLNKREMKILYYPFYSRT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00297 436 SUPERFAMILY CoA-dependent acyltransferases 263 396 - -
Spst4g00297 436 PANTHER - 6 427 - -
Spst4g00297 436 Gene3D - 2 220 IPR023213 -
Spst4g00297 436 Pfam Transferase family 10 427 - -
Spst4g00297 436 Gene3D - 229 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00297 Spst-Chr4 3395861 3397171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00297 1 428 Monolignol Biosynthesis Gene Families AT5G48930 26.411 5.39e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00297 - - gmx:100800849 562.377