Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00295 ATGGCTGAACAAGCATCACCAGCTCCTTTCAAAGTTATCCAAGTTTGTTCAGTGGCACCACTTCATGAGCCAACCATTTCCACCATTGTTCCAACCTCTCTTCCACTAACCTTCTTTGACCTCTTATGGCTGCGCCTTACACCCGTAAAATGTCTCTACTTCTATCCCTTCCCCCACCCAATCTCTTCATTCCATCACTCTCTTCTTCCCTCTCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTTCTTCCTTTTGCTGGCACCCTCACATGGCCCTGTCACTCTCCCAAACCTATCATCAACTATTTACCTGGCGACACTGTTTCCTTCGTTGTTGCTGAATCCAACAAAAACTTCAACCATCTTAGCTCCCAGCTCTGTGAAGCATCACAACGACACGGTTTGGCCCCCGACTTGGCCATTTCCAATGATAAAGCATCTCTGTTGGCAATTCAAGTCACTGTGTTCCCAAACGCTGGCTTTTGCATTGGAATAAACGCACACCATGCAGCTTTTGACGGAAAATCTGCAACCATGTTCATGAAATCATGGGCCTCGATATGCTCTAAACTTAAAAACCCTAATACATCTACACCAACACCATCCTTACCTCATCATCTTACTCCTTTCTGTGACAGATCATTGATAAGAGAACCTACTGGAATTGCTGAAGTGTATGTTGACACGTGGATGAATCATAATGGTTCGACTAACCGAAGTCTCAAGCCGTGGGAGGTTGTTACTACAAAGCTAAGTGATGGACTCAAAGGTTTGTTTGAATTGACCCCCTCACAGATTCTAAAGCTCAAACAACATGCAAACTCTAAGGTGAAAATGAATGTTCATCCGTCAACATTTTCTGTTACGTGTGCTTATGTGTTGGCGTGTTTGGTCAAAGTGAGACAAGTGAAGGAAGATACCGTGGGTTTCATATTTTATATTGACTGTAGATCACGCTTGGACCCTCCAATTCCCGCCACGTATTTTGGAAACTGCGTTGCAAAACAAATGGTTGTGGCTTTGACTAAGGAGTTGGTTGGAAATGATGGATTCATTTGTGCTGTGGAGGGGATAAGTGAGGCTCTGAATAGAGTGAAGGATGAAGGAGTGTTGAATGGAGCAGAAAGATGGGTTTCGGATATGAATGAATTTTTGGAGGGTAGAATATCTGTTGTTGGATCTCCTAGGTTTGAGGTTTACAGTATTGATTTTGGGTGTGGAAGGCCAAAGAAGGTGGATATCAGTTCAATAGACGGAGAAGAAGCATTTTCTCTTAATGAAAGTAGAGATATCCATGGAGGAGTTGAGATTGGATTGACGTTAAGTAAAGCTGAGATGGAAGAATTTACTACCCTTTTTATTCAAGGACTTGATTCTCTTTAG 1386 0.4293 MAEQASPAPFKVIQVCSVAPLHEPTISTIVPTSLPLTFFDLLWLRLTPVKCLYFYPFPHPISSFHHSLLPSLKHSLSLTLQHFLPFAGTLTWPCHSPKPIINYLPGDTVSFVVAESNKNFNHLSSQLCEASQRHGLAPDLAISNDKASLLAIQVTVFPNAGFCIGINAHHAAFDGKSATMFMKSWASICSKLKNPNTSTPTPSLPHHLTPFCDRSLIREPTGIAEVYVDTWMNHNGSTNRSLKPWEVVTTKLSDGLKGLFELTPSQILKLKQHANSKVKMNVHPSTFSVTCAYVLACLVKVRQVKEDTVGFIFYIDCRSRLDPPIPATYFGNCVAKQMVVALTKELVGNDGFICAVEGISEALNRVKDEGVLNGAERWVSDMNEFLEGRISVVGSPRFEVYSIDFGCGRPKKVDISSIDGEEAFSLNESRDIHGGVEIGLTLSKAEMEEFTTLFIQGLDSL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00295 461 Gene3D - 254 461 IPR023213 -
Spst4g00295 461 Pfam Transferase family 32 451 - -
Spst4g00295 461 SUPERFAMILY CoA-dependent acyltransferases 285 459 - -
Spst4g00295 461 Gene3D - 10 242 IPR023213 -
Spst4g00295 461 PANTHER - 11 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00295 Spst-Chr4 3305586 3306971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00295 51 456 Monolignol Biosynthesis Gene Families AT5G48930 25.768 1.92e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00295 - - gmx:100800849 582.022