Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00290 ATGAGGTTCAACAGTATTACCTCCTTAAAATTCTTCCTCCTCTACCTCTTTACACTCTTTACAGATCTCCAAGCCTATACCCCGGTGAACCATTTCACAATCAGTTGCGGCACCATTGGAACATCCTACGACGGTGAAAGGACATGGACAGGGGACACAGGTTCAATGATCTTGTCCCATCAAGAGGGCACAGTTTCCGCTAATGCCACAACACCACAATCTAATACCACCCTTCAAGTCCCTTACACCACAGGACGCTTGTCTCGTTCCCAATTCAATTACTCCTTCCCCGTCACCCCAGGCTCCAATTTCCTTCGCCTCTTCTTCTACCCGGCTTCCTACCCTTCCTTTCCCAGCACACGCGCATCCTTCACCGTTCATTGCAACCAATTCACCCTCCTCAACGATTTCAACTTTGACGCAGAAGACAAGAAACCCATCTTCAGAGAGTACGTGATCAACGTTTACAACGGTGAGAGACTCAACCTCAGCTTCACTCCCTCACAACCAAACTCCTACGCTTTCATCAACGGGATTGAGGTGTTTTCCATGCCAAGCAATCTCTATTACATGTCAGCACATGACGCGGGCTTCAAGCTCGTGGGGACCGACACGCTGTACTACGTTAGAACCAACACTGCTCTGCAGACAGAGTATAGACTCAAGGTAGGAGGACAAGGAATTTCGCCGCGAAACGACACCGGTTTGTTCAGAAACTGGGCTGATCTCGACGAACATTATTTAATTAAACAAGAAAATCCAAACAACAATGATCTGGTAGGCGACGTGGATGTTGCGGATGGTAAGATGAACATAACCGTGAACCCTGATTATGTGGCACCCAAGGAACTGTACAGAACAGCGCGTACCACGAAGAGATCCCTTAAGTTGACTTGGGAGTTCGCCGTTGACCCTGGTTTCAGTTACCTGCTCAGGCTCCACTTTTGCGAACTTGATCCGAATATAACTAAAATCGGTGACAGGGTGTTCTTCATTTACATAGGGAGCGACTTGGTTGGGGATCGTGCTGATGTTATGAGATGGAGCCAGCAACAAAAAGGTCTCGCAGTGCAGAAAAACTACGTCGTTTTGATTCCCAAAAATGATACTCAGAAAAAGGTTAGTCTCTCGCTCCAATTGCATCCTTATGAGAATTCGAGCAATCCGTTCTTGAACGGTCTCGAGATCTTCAAAATCAGCGACTCTAACAACCTCGCCCGACCTAACGCGCAGAACGGCATAACAGTAGAGAAGAGGAGGAGCAGAAAACTAATAATTATCATAGCAGGGGTGGTATCCGGCGTCCTTTTCCTCTCGCTGGTTTGTTTCTTCGTCGTTTCGTGGGCGAGATCCAAGTTCGGTCCACACTTCTCAACGCACGGACCATCAACCAACGCGAAGTTTTACAGGAATTACCAGTGGCCGTTCGATCTTCTCTGCCAGCGCTTCTCTCTCATCGAGATCAAAGCCGCCACCAACAACTTCGACGATGCCTGCGTCGTTGGCATCGGAGGATTCGGCCACGTGTATAAGGGCTTCATCAACGATATTTCCATCCCGGTGTCTATCAAGCAGCTCAAACCAGGTTCAGAGCAGGGCTTCATCAACGGAAATTCCATCCCGGTGGCTATCAAGCGCCTCAAACCGGGTTCAAAGCAGGGAGCTGAAGAGTTCGTGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCGCAATCTCGTTCCACTCATCGGCTACTGCAACAACGAGAAGGAGATGATCCTGGTATACAATTTCATGGCACGTGGCAACCTCCGCGACCATCTCTACAACAGTGATAAGCCTCCTTTGCCATGGAAGCGACGCTTGCAGATTTGTATCGACGCGGCGCACGGGCTGCATTATCTTCACAGATGCGCCAAGACATACACGATCATCCACAGCGACGTGAAAACCACAAACATCTTGTTGGATGAGGAGTGGGTGGCCAAGGTTTCGGACTTTGGGCTTTCCAGAATTGAGCCCACGGGTGGGTCCGAGGCCCATATCTGCACCACCGCCGTGAAAGGTAGCTTTGGGTATATAGACCCGGAGTATTATAAACGGCAGCATTTGACGGAAAAGTCTGACGTGTACTCTTTCGGGGTAGTGCTGTTTGAGGTACTGTGCGCTCGTCCGCCTCTGATCCACACCCCGGAGCCAAGACAGGAGTCGCTTGGTAATTGGGTTAGGTACTGTTACAAAAATGGGACCATGGCACAGATATTGGACCCCACGTTGAAAGGGAAGATCGCGCCCAAATGCTTTAGAATGTTTTGCGACATTGGGGTGAGTTGTTTGTCTGAAGTTGGCACGCAGAGACCGTCCATGAACGACATCGTTTCCAATCTTATGTTTGCGCTGCAACTACAAGAAAGTGCAGAAAATGAAGAGAGAAGAAATTAG 2424 0.4926 MRFNSITSLKFFLLYLFTLFTDLQAYTPVNHFTISCGTIGTSYDGERTWTGDTGSMILSHQEGTVSANATTPQSNTTLQVPYTTGRLSRSQFNYSFPVTPGSNFLRLFFYPASYPSFPSTRASFTVHCNQFTLLNDFNFDAEDKKPIFREYVINVYNGERLNLSFTPSQPNSYAFINGIEVFSMPSNLYYMSAHDAGFKLVGTDTLYYVRTNTALQTEYRLKVGGQGISPRNDTGLFRNWADLDEHYLIKQENPNNNDLVGDVDVADGKMNITVNPDYVAPKELYRTARTTKRSLKLTWEFAVDPGFSYLLRLHFCELDPNITKIGDRVFFIYIGSDLVGDRADVMRWSQQQKGLAVQKNYVVLIPKNDTQKKVSLSLQLHPYENSSNPFLNGLEIFKISDSNNLARPNAQNGITVEKRRSRKLIIIIAGVVSGVLFLSLVCFFVVSWARSKFGPHFSTHGPSTNAKFYRNYQWPFDLLCQRFSLIEIKAATNNFDDACVVGIGGFGHVYKGFINDISIPVSIKQLKPGSEQGFINGNSIPVAIKRLKPGSKQGAEEFVNEIEMLSQLRHRNLVPLIGYCNNEKEMILVYNFMARGNLRDHLYNSDKPPLPWKRRLQICIDAAHGLHYLHRCAKTYTIIHSDVKTTNILLDEEWVAKVSDFGLSRIEPTGGSEAHICTTAVKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEVLCARPPLIHTPEPRQESLGNWVRYCYKNGTMAQILDPTLKGKIAPKCFRMFCDIGVSCLSEVGTQRPSMNDIVSNLMFALQLQESAENEERRN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00290 807 SUPERFAMILY Protein kinase-like (PK-like) 477 793 IPR011009 -
Spst4g00290 807 SMART serkin_6 495 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00290 807 FunFam Receptor-like protein kinase FERONIA 593 807 - -
Spst4g00290 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Spst4g00290 807 Gene3D Transferase(Phosphotransferase) domain 1 594 807 - -
Spst4g00290 807 FunFam FERONIA receptor-like kinase 31 185 - -
Spst4g00290 807 Pfam Protein tyrosine and serine/threonine kinase 501 790 IPR001245 GO:0004672|GO:0006468
Spst4g00290 807 Pfam Malectin-like domain 34 399 IPR024788 -
Spst4g00290 807 Gene3D Phosphorylase Kinase; domain 1 537 593 - -
Spst4g00290 807 FunFam FERONIA receptor-like kinase 213 400 - -
Spst4g00290 807 PANTHER OS03G0124300 PROTEIN-RELATED 7 456 IPR046957 GO:0004672
Spst4g00290 807 Gene3D Phosphorylase Kinase; domain 1 475 536 - -
Spst4g00290 807 ProSiteProfiles Protein kinase domain profile. 495 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00290 807 Gene3D - 214 400 - -
Spst4g00290 807 Gene3D - 31 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00290 Spst-Chr4 3226451 3228874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00290 26 801 Receptor kinase-like Gene Family AT3G51550 44.740 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst4g00290 Malectin_like 4.2e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00290 - - vun:114180426 1110.9