Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00289 ATGAGCTTCTTCAGTTTCACCACCTCCTTAACACTACTCTTCTTCCTTCTGCACTTCTCCATACACCTAAAAGCCTACACCCCAGTTGAAATTTTCACCATCAGTTGCGGCACCACCGGGAAATCCTCCGACGGTGAAAGGACGTGGACCGGGGACGCAGACACAAAGTACTTATCTCTCCAAGACGGCACCGTTTCGGACAAGGCAACAACACAATCACCTTCCGTCAATCAAGTACCCTTCACCACAGCACGCTTGTCCCGTACCCAATTCAATTACTCCTTCCCCGTCTCCACAGGCTCCAAATTCATTCGTCTCTTTTTCTACCCTGCCGATTACCCTTCCTTTCCCCGCAACCACGCTTCTTTCACCGTTCAATCCAACCAATTCACGCTCCTCAACGGTTTCAACGCCTCTCTAAACGCCGACGCTGAAAACACCGAAACTATCTTCAGAGAATACGTAGTCAACGTCAACGACGGTGACAGGCTTATCCTCAGCTTCACTCCCTCGCAACCAAACTCCTACGCTTTCGTCAACGGAATCGAGGTACTTTCCATGCCAACCGATTTATATTACACCCCAGCCAATGAGACAGGAATTAAGTTCTTGGGAAGTAGCACTTTGTATAGTATTGGAACCAGTTTTGCGCTTGAGACAGAGTATAGAATCAAAAGTGGAGGGCAACAAATCCCGCCACAAAACGACACCGGTTTGTTCAGGAAATGGGATGATGAAGAAGGTCATTTTATTAAACAAAATCCAAAGAATGATGATATACCAGCTGACATAGATGGGAAGATGAACATAACAGTGAATCCTGATTACGTGGCACCCAAGGAACTGTTCAGAACAGCGCGTAGCATGGGCAGAAACGCCACCCTGAACATAATCAGCAACCTCACTTGGGAGTTTCCCGTTGATTATGGCTTCACTTATGTCCTCAGGCTCCACTTTTGCGAGCTTGATCACAACATTAATAAAATCGGTGACAGAGTGTTCTCTATTTACATAGCGAGCCAGTTGGCTGATGATCGTGCAGATGCACTGAGATGGAGCCAAAATAAAAAAGGTATCGCTGTGCACAGAAACTACGCCGTTTTGATTCCCAAGAATGATACTAAGAAAAAGTTTAATCTCTCGCTTCAAATGCAGCCTTATGGAAGTGGTACTGATTCGACTTACACCGACGCGTTCTTAAACGGTCTCGAAATCTTCAAAATAAGCGAGGCTGGCTCAAACAACCTCGCCGGACCCAACCCGGATCCGGTTCAGACTCCGCAGAACAACATACCCGGTCAAAACGGAAATACCAGTAGCAGAAATGGAACGACGATAATTGGCGTCGTCGCAGGGGTGGTATCCGGCGTCGTTTTGATCTCGCTCATCGTTTTCCTCGTCGTGTTTTTCCGGCGCAAGAGAACCACAAAGCCAAAAGATTACAACAAGTCAAAGTCTTCCGCGACTTCCAAGTGGGGTCCACTCTCCTTCACAACGATCAAGTCAACCACCACGAACTCCTCTCTACCGTCCGATCTCTGCCGCCACTTCTCCCTGGCGGAGATCAAAGCCGCCACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGGGGTTTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCACCCCCGTTGCCATCAAGCGCCTCAAACCGGGTTCGCAGCAGGGCGCGCACGAATTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGTCACCTCCATCTCGTGTCCCTCATCGGGTACTGCAATGAGATGAACGAGATGATCCTGGTCTACGACTTCATGGCGCGTGGCACCCTACGCGACCATCTCTATAACACCGACAACCCAGCTCTCTCGTGGAAGCAGCGTTTGCAGATCTGCATCGGCGCAGCGCGTGGACTGCACTACCTCCACACGGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACCACGAACATATTGTTAGACGATAAGTGGGTGGCGAAGGTTTCGGACTTCGGGCTTTCCAGAATTGGGCCCACGGGCATGTCCAAGGCCCATGTCAGCACAGTCGTGAAGGGCAGCATTGGGTATTTAGACCCAGAGTATTACAAACGACAGCGTCTGACGGAAAAGTCTGACGTGTACTCTTTTGGTGTGGTGTTGTTCGAGCTACTCTGCGCTCGTCCGCCTCTGATCCGCACCGCGGAGAAGAAACAGGTGTCACTCGCTGATTGGGCGAGATACTGTTACCAAAATGGGACCATCGCGCAGATTGTGGACCCCGCGTTGAAGGGGAGGATCGCGCCTGAGTGCTTGAGGAAGTTCTGCGAGATTGGCGTGAGTTGTTTGTTGGACGATGGAACGCAGAGGCCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTCGCGTTGCAGTTGCAGGAGAGCGCGGAACAGCGCGAAAATGGTAATGTGATTTCTGGTGAGGGGGTTAATGAAAGAGGAAGGGAAGGTGGTGAGGATTTGTTCAGTAGTGGAACCAGTCTGGGCCAGGTTTCGGATTTTAACAAGAGTAGTGGGACCAGTGTGGTGAGTGTGAGTACGAGTAGCGAAGAGCTTAGCAGTAGCTACAAAGAGAGCGATAGATTGGTGTCTGGGACTGTTTTCTCTGAAATCGTTGACCCAAAGCCACGTTGA 2679 0.5073 MSFFSFTTSLTLLFFLLHFSIHLKAYTPVEIFTISCGTTGKSSDGERTWTGDADTKYLSLQDGTVSDKATTQSPSVNQVPFTTARLSRTQFNYSFPVSTGSKFIRLFFYPADYPSFPRNHASFTVQSNQFTLLNGFNASLNADAENTETIFREYVVNVNDGDRLILSFTPSQPNSYAFVNGIEVLSMPTDLYYTPANETGIKFLGSSTLYSIGTSFALETEYRIKSGGQQIPPQNDTGLFRKWDDEEGHFIKQNPKNDDIPADIDGKMNITVNPDYVAPKELFRTARSMGRNATLNIISNLTWEFPVDYGFTYVLRLHFCELDHNINKIGDRVFSIYIASQLADDRADALRWSQNKKGIAVHRNYAVLIPKNDTKKKFNLSLQMQPYGSGTDSTYTDAFLNGLEIFKISEAGSNNLAGPNPDPVQTPQNNIPGQNGNTSSRNGTTIIGVVAGVVSGVVLISLIVFLVVFFRRKRTTKPKDYNKSKSSATSKWGPLSFTTIKSTTTNSSLPSDLCRHFSLAEIKAATNNFDDVFIVGVGGFGHVYKGYIDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMARGTLRDHLYNTDNPALSWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVSLADWARYCYQNGTIAQIVDPALKGRIAPECLRKFCEIGVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQRENGNVISGEGVNERGREGGEDLFSSGTSLGQVSDFNKSSGTSVVSVSTSSEELSSSYKESDRLVSGTVFSEIVDPKPR 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00289 892 FunFam Receptor-like protein kinase FERONIA 606 821 - -
Spst4g00289 892 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Spst4g00289 892 MobiDBLite consensus disorder prediction 838 874 - -
Spst4g00289 892 Pfam Malectin-like domain 34 408 IPR024788 -
Spst4g00289 892 CDD STKc_IRAK 535 802 - -
Spst4g00289 892 FunFam Receptor-like protein kinase FERONIA 501 605 - -
Spst4g00289 892 MobiDBLite consensus disorder prediction 416 439 - -
Spst4g00289 892 Gene3D Phosphorylase Kinase; domain 1 494 605 - -
Spst4g00289 892 FunFam FERONIA receptor-like kinase 216 409 - -
Spst4g00289 892 Gene3D Transferase(Phosphotransferase) domain 1 606 826 - -
Spst4g00289 892 ProSiteProfiles Protein kinase domain profile. 529 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00289 892 PANTHER OS03G0124300 PROTEIN-RELATED 8 482 IPR046957 GO:0004672
Spst4g00289 892 Pfam Protein tyrosine and serine/threonine kinase 535 799 IPR001245 GO:0004672|GO:0006468
Spst4g00289 892 Gene3D - 217 409 - -
Spst4g00289 892 Gene3D - 30 188 - -
Spst4g00289 892 MobiDBLite consensus disorder prediction 820 874 - -
Spst4g00289 892 FunFam FERONIA receptor-like kinase 31 188 - -
Spst4g00289 892 SUPERFAMILY Protein kinase-like (PK-like) 506 804 IPR011009 -
Spst4g00289 892 SMART serkin_6 529 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00289 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00289 Spst-Chr4 3222035 3224713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00289 21 892 Receptor kinase-like Gene Family AT3G51550 50.780 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst4g00289 Malectin_like 1.5e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00289 - - gsj:114381619 1390.94