Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00278 ATGTCTAAAAAGGTTTTGATATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTCTTTGACCGCCACAGGGTCCTCACAGGCCACCGCAGTAACAGCCACAATCAGAATATCCCAATTAAAGGTGGTACAAGGAACCATGTCAAAGAGGTGAATAATACAACTCAAAAGGCAACGGGAAATAATGTGAAGGTTGCAGGAGAGAATCAACAATTCTCAACAGAATCATCTGGAACTTCAATGTCTTCATCATCTCGTTCATCTAGCATGTCATCCCTCGAGTTCAGTAGAACAATTCAGATAGATCCACCACCATTCAGTCCAATGAAAATTCCAGAAAACTCTAATTCAGAAGTATCAATGAAGCAACATGGCAACCAAGGCCCTCAATCCCTTGATTTCTATGATATTGTCAAAGAGTCAATGCATAGAGATGTTCAAGGATTGTCAGTAAAAATTGCAGCTAAAGAGGATAAGAAGGGTAGAATCTTGAAATACATTGACTCTCCCAGGCCATTGGAGCCCCCAAAACCTGTCAATATGGTTGCTTGGGATTCCCCGAGACTCTCTTATGATGGGAGGGACGCACAAGATACATTAAAATCTGCTATAAAGCCCAAGGAACTCCCCAGGCTTTCCTTGGATAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGTGGCCTTTTGAAGGGTCCACAGAAAGGGTGTGGTAGCTCTGGCACAATGCTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCTGGTGTTGTAGTAAGGTTGATGGGACTAGAAGCCTTCCCAGACAGCGCTGAAACTTATGATCCTCCGCCCCGGATTTCTACCAACAATGATGAATACAAGCAACACCAAAGTGCAGCATCCCTGAGAACAATGGAGGGGTCTACCTTGTTTCAGTTTAGGAGGGATGCTTCAATCATGAATGTGACACCGTATTCACGGTTTTCCCTAGAACCAACTCCATGGAGGCAACCTGAAGCAAGCCAAGGTTCTCCATTGCAGACTCCCAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCTATCCCTCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAGATCTAGAGTTCAAAAATTCTGGAAAGGATCTTAGAGCCCTTAAACAGATTCTTGATGCAATGCAGAGATACAAAGAATCATTAGATACTACAAGGGATCAGGCTTCAAATTCTCTATCTGACAATAGAAGTAATAGCAGTCTTAGTGAAAGCTCGATAGTTAAAAGCCCAAGAATACGGCAGAAGGACCCAACATCCTCCACTATTGAGATGTCAAATTCAACCCAGGGTAGTAAGTCACCAATTTTCATCATGAAACCAGCAAAAGCTACAAGAAAAAACATCAGTCCTGCTTCCACAGAAATGACATGTCAGGGTAAATCCAGCCCCAGCAAGTTTGGTCCTGCTAACCCTGCAAATGGAATAATGGGTGACAAGCTTGACAGGAAAACAGGAAAGGGTATCAGTCCCGCAATCAGACCTGCCAAGGATTCCATTGGTCAATCCTTTCCCCCAGTGGATAAGAGTAACAATAAGATGAGAACATCAAAATTGATGGAATCCCAAAAAGGCCCTCAAGCAATCGACGGAGAAAATGCCACCAACTCCAGCAATACAGCACAGGCCAAGAGCCCAAGATTACAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCAACAACTAGCCTATCATCAGATTCAAGCAGTAACAGAAGACACCACAATAGGCAATCGGTGGAATTGTCTTCGCAAAGTACTACACCCAGACAAAAATCCAGTGAGATAAAAAACCAAAGGGGGGGCTTTAAGCATGAAGTTGACGTAGAAGTCATGCACATTGATCATTCTGATAGGATCAAAAGCAACTCCATCCAGTTAAAGGGAATGAATCAAAATAATGCAGCAAAAGAGTTTAGCAAGGAAAGCTTTATGGCTGAGAAAATAGTTATAGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATCCTGCTTTCTACAGTGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATCTCGAAAGATTTAGATGATGCTCTCAACACTTACGACATTACTGAGGAGAACTCAGAAGATCTACCTCTTTCATCTAACACTGCAAAAGCCAACTTCAGCAGTGGGTTCAGTGATACTGACTTGAGAACTCAAAATTTAGTTCAAATTCTCCATCAAATTGACTCCAATGATGAGAGATTTACCAATTTCAGAGATTATAAAGATCCTCCCCATAAGTATATATTAGAAATACTGTTAGCATCAGGCCTGCTCAGCAGTCCAAGCTCTTGCTACGTTTTTCATTCATCAAGTCACCCGATAAACCCGAAGTTGTTCATAGCACTAGAGCAAATCAAGACAAACAAAAAGTGTTTCAATATTGAATACAATGGCAAGAAAATTGCTGGGCTCAACAGTCCTGAACAATTGCAAAGAAAGCTAATATTTGATGTCGTTAATGACATTCTATCTCAGAAAATAATATTGGAAAGTTCTACCCAGTGGTGCCAGTCAAATCAGCCAGTTAGTAGAAAACTGAGAGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGACAAGTTACAACATAAAAATAGGAATGTACACCTGGTTAATGTGGATGAGAATATGACAAGTATCCTGTGGGAAGAGTTGATGCACTGTCCGACAATTTACGCAGACAATTACATGGAAATCCCAAATGTGGTGTTGGATATTGAACGGTTGATCTTCAAGGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAGCCATTCTGGTAAGCATTGCAGACAACTGCTGTTTTCCAAGTAG 2925 0.4154 MSKKVLISMKDENPDLQKQIGCISGFFQLFDRHRVLTGHRSNSHNQNIPIKGGTRNHVKEVNNTTQKATGNNVKVAGENQQFSTESSGTSMSSSSRSSSMSSLEFSRTIQIDPPPFSPMKIPENSNSEVSMKQHGNQGPQSLDFYDIVKESMHRDVQGLSVKIAAKEDKKGRILKYIDSPRPLEPPKPVNMVAWDSPRLSYDGRDAQDTLKSAIKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGPQKGCGSSGTMLKQLQEPETSRRSSGVVVRLMGLEAFPDSAETYDPPPRISTNNDEYKQHQSAASLRTMEGSTLFQFRRDASIMNVTPYSRFSLEPTPWRQPEASQGSPLQTPKRSESSAKASNLSLSVYGEIEKRIADLEFKNSGKDLRALKQILDAMQRYKESLDTTRDQASNSLSDNRSNSSLSESSIVKSPRIRQKDPTSSTIEMSNSTQGSKSPIFIMKPAKATRKNISPASTEMTCQGKSSPSKFGPANPANGIMGDKLDRKTGKGISPAIRPAKDSIGQSFPPVDKSNNKMRTSKLMESQKGPQAIDGENATNSSNTAQAKSPRLQKKFGLERRSPTTSLSSDSSSNRRHHNRQSVELSSQSTTPRQKSSEIKNQRGGFKHEVDVEVMHIDHSDRIKSNSIQLKGMNQNNAAKEFSKESFMAEKIVIAEQPSPVSVLDPAFYSEEPPSPVKKKSDISKDLDDALNTYDITEENSEDLPLSSNTAKANFSSGFSDTDLRTQNLVQILHQIDSNDERFTNFRDYKDPPHKYILEILLASGLLSSPSSCYVFHSSSHPINPKLFIALEQIKTNKKCFNIEYNGKKIAGLNSPEQLQRKLIFDVVNDILSQKIILESSTQWCQSNQPVSRKLRGQLLLDELCTEIDKLQHKNRNVHLVNVDENMTSILWEELMHCPTIYADNYMEIPNVVLDIERLIFKDLITEVVRSELASHSGKHCRQLLFSK 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00278 974 Pfam Domain of unknown function (DUF4378) 780 953 IPR025486 -
Spst4g00278 974 MobiDBLite consensus disorder prediction 412 633 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 534 576 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 415 465 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 338 368 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 253 269 - -
Spst4g00278 974 Coils Coil 398 418 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 477 499 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 64 108 - -
Spst4g00278 974 PANTHER LONGIFOLIA PROTEIN 8 970 IPR033334 GO:0051513
Spst4g00278 974 MobiDBLite consensus disorder prediction 609 625 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 64 117 - -
Spst4g00278 974 MobiDBLite consensus disorder prediction 245 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00278 Spst-Chr4 3089048 3093558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00278 142 973 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.736 1.30e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00278 - - gmx:100793602 1451.8