Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00273 ATGGAGCAATTAACAAGTGTGAAAGTTCTCCAGGTTTGCACTGTGACACCATCACAGGGAGCAACAACCAATTCCTCCACCCCAACATCTTTGCCTCTCACATGCTATGACATAATTTGGTTAAGGCTTCCCCCAGTTAAACGTCTTTTCTTCTATGAACTTCCCAACCCAACCATTTCATTCTTTGACTCCATTCTTCCCAATCTCAAGAATTCTCTTTCCCTCACTCTCCAACACTTCCTCCCTCTTGCTGGCACCATCATTTGGCCCCTTGACTCTCCCCACCCTATCATCAACTATGTCCCTGGAAATGCTGTTTCCCTCACTATAGCCGAGTCCAACTCTGATTTCAACATACTTTGTTCCAATACCTGTGAGACTTCTCAACAACACCCCTTGACGCCCCAGTTAGCCAATTCCCATGAAAAAGCATCAGTGATAGCCCTCCAGGTTACTTTTTTCCCTAGCTCTGGATTTAGTCTTGGTATCGTCGCACACCATGCAGCTATGGATGGAAGAGCCTCAACTTTTTTTCTCAAAGCATGGGCCTATGTCTGCTCCAATAACCTCAAAGAATCTTCATTATTGTCATTGCCAAAACATCTAACACCCTTCTATGATAGGTCAATGATAAGAGACACCACAGGGATTGGTGCAACGTATCTGAAAGATTGGCAAGGAGGATCAAACAACAGGAGCGTGAAGTTGTTCGATTTTGGCGGTTCAGTGTCAACCGAATTAATTAGAGGGTCGTTTGAATTAACCTCTTCAAATATCCAAAAGCTCAAGGAACATGCAGAACCGATGCTGAAAGAGAATGCTCGCTTGTCAACATTTTTAGTTACATTTGCTTATGTGTTGCCATGTTTGATCAAAGCAGAACAACCTAAGACCAATGGAGTGGCGCTTGTGTTCAGTGCGGATTTAAGGTCTCGCTTGTCGCCACCTATTGCGTCCACATATTTTGGAAATTGCATTAGTGGCCTGAAGGTTATAAATGAGACAAAGAAGTTGTTGGGGGACGATGGTTTCATCAACGTTCTTAAGGGATTGAAAGAAGCTTTGAATAGGTTGGAGGATGGATGCCTGAGTGTGGCAGAACCTTTATCTGAGAATAGGCAAATTTTAAGGGATAAAAAACTTTTGGCCATATCAGGGTCGCCACGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGGCCCAAGAAGGTGGATATACCTTCTATAGGAAAGAGTGGAACAATTTCTTTTTCGGAGAGTAGGAACGAGAATGGAGGAGTTGAGATTGGTTTGGTGTTAGACAAACAAGAAATGGAAGCTTTCACGACTCATTTTACTGAAGGGCTTGAATCCCTTTGA 1362 0.4317 MEQLTSVKVLQVCTVTPSQGATTNSSTPTSLPLTCYDIIWLRLPPVKRLFFYELPNPTISFFDSILPNLKNSLSLTLQHFLPLAGTIIWPLDSPHPIINYVPGNAVSLTIAESNSDFNILCSNTCETSQQHPLTPQLANSHEKASVIALQVTFFPSSGFSLGIVAHHAAMDGRASTFFLKAWAYVCSNNLKESSLLSLPKHLTPFYDRSMIRDTTGIGATYLKDWQGGSNNRSVKLFDFGGSVSTELIRGSFELTSSNIQKLKEHAEPMLKENARLSTFLVTFAYVLPCLIKAEQPKTNGVALVFSADLRSRLSPPIASTYFGNCISGLKVINETKKLLGDDGFINVLKGLKEALNRLEDGCLSVAEPLSENRQILRDKKLLAISGSPRFEVYSIDFGWGRPKKVDIPSIGKSGTISFSESRNENGGVEIGLVLDKQEMEAFTTHFTEGLESL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00273 453 Gene3D - 2 235 IPR023213 -
Spst4g00273 453 Pfam Transferase family 7 447 - -
Spst4g00273 453 PANTHER - 6 452 - -
Spst4g00273 453 Gene3D - 244 453 IPR023213 -
Spst4g00273 453 SUPERFAMILY CoA-dependent acyltransferases 273 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00273 Spst-Chr4 3043342 3044703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00273 49 448 Monolignol Biosynthesis Gene Families AT5G48930 25.240 2.14e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00273 - - gmx:100785084 624.78